Gene Cthe_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2550 
Symbol 
ID4809306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3019150 
End bp3020133 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content30% 
IMG OID640107965 
Productglycosyl transferase 
Protein accessionYP_001038944 
Protein GI125975034 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3774] Mannosyltransferase OCH1 and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCTA AAGTCATTCA TTACTTTTGG TTTGGAAGAG GCAAAAAAAA TGACGTAATC 
GAACGATGTA TGGACAGTTG GAAAGTTCAC TTGCCAGATT ACGAAATTAA AGAATGGAAT
GAGGATAATT TTAATGTGCA TATCAATAAT TTTACTTTAC AGGCTTATCA GATGAAAAAG
TGGGCTTTTG TATCCGACTA TGCCAGATTA CATATTTTAT ATCATTATGG AGGTATCTAT
TTAGATACAG ATTTGGAAAT AACAAATTCA TTAGACCCGT TTTTAGATTA TGAAGGCTTT
ATGGGTTTTT TTTCAAATTT TGATATTAGC GGAGGAATTA TTGGAGCAGC AAAAGGAAAT
AAATTCATTA AAAAACTGTT AACTTATTAT GAAAATAAAA ATTTTATTGA TGGAAATGGA
AAAATCGACG AAAAAACTAA TGTTGAAATT ATTACTGAGA TTTCCAAAAA ACATTTTGGC
TTTGTAGGAG AAAACCAAAC GCAGCAAATA CTGGACATGA CTATTTTCCC CAAAGAATAT
TTTACAGTCA GAGATGTTAA TGTAAAAAAT TATGCCATTC ATCACTATAA TGCTTCCTGG
CTTTCGCATG AAGAAATGAA TAAACATTTA AAGAGCTATA GAAAGTATTA TGAGTTTACA
GTTAAATGGC TTGATAACCT TATTAATAAC AAGATAGATT TAACACCTTA CAAAAATAAA
TGCATTGCCA TATTTGGCAA GGGATATATT GGCGAACTGC TCGTAAGCTA TCTCCAAAAT
AATAATGTGC CAATAAGGCA GATAATAGAT ACAAAGTTTG CAAATGACAC CTACAAAGAT
ATCCCCATTG TATCATCGGA TACAATTAGT GATGAAGTTA ATCTTATAAT TATTACGCCC
ATTCATAGCT TTGAAAGCAT ATATTTATCG TTAAAAGAGA AATCTTGCGC AGATATTATA
TCAATTGAGA ATCTGTTATC ATAA
 
Protein sequence
MIPKVIHYFW FGRGKKNDVI ERCMDSWKVH LPDYEIKEWN EDNFNVHINN FTLQAYQMKK 
WAFVSDYARL HILYHYGGIY LDTDLEITNS LDPFLDYEGF MGFFSNFDIS GGIIGAAKGN
KFIKKLLTYY ENKNFIDGNG KIDEKTNVEI ITEISKKHFG FVGENQTQQI LDMTIFPKEY
FTVRDVNVKN YAIHHYNASW LSHEEMNKHL KSYRKYYEFT VKWLDNLINN KIDLTPYKNK
CIAIFGKGYI GELLVSYLQN NNVPIRQIID TKFANDTYKD IPIVSSDTIS DEVNLIIITP
IHSFESIYLS LKEKSCADII SIENLLS