| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2465 |
|---|
| Symbol | |
|---|
| ID | 4809845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 2937114 |
|---|
| End bp | 2938019 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640107880 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001038860 |
|---|
| Protein GI | 125974950 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000796539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA AGTTAATGGA ACTAGAACAG AGAGAAAACA TAAATGCGAG CATAAGTATA
TTGGGCAGCG TGGATATTGC GCAGGTCCAA CAGATCCTAA CGAGTATAGA AAAATTTCAA
ATGGTTGTTC AAAAAACGCT AAATGAAGGC CATGACTATG ATATTATCCC AGGCACATCG
AAGCCATCAC TTTTGAAGCC AGGGGCAGAG AAAATTTTGG TGTTGCTCGG GCTCACGTCG
GAATACGAGA TTATTGAAAA AATAGAGAAT TATGAGAAGG GCATATTTGC ATATACGGTT
CGATGCATTC TGTCTAAAAA CGGGAAAAAG GTTACAGAAG GACTGGGCTC ATGTAATTCC
AAGGAGGATA AATACCGGTG GCGGTGGGTA TCGGAAAAGG ATCTCCCACC GAATGTTGAT
AAAGATATGC TGAAGAGCAA AACCAATGAG TACGGCCAAA AGCTATACAG GATTGAGAAT
GACGAGATAT TTACTCAAGC GAATACAATC CTTAAGATAG CCAAGAAGAG AGCACAGATA
GATGCGGTAC TTACAGTCGC TGCATTGAGC GAGATATTTA CACAGGATGT GGAAGATATG
CAGGAGTTTC TGCAGAACGA ACAGCTTGAA ACCATGAAAG CAGAGGAGGC TGTAAATGTT
AAGGTCACGT TCGGCAAACA CAAGGGTAAG ACGCTTGGCG AAATATACAG CCAGGCACCG
GACTATGTGC AGTGGCTTGC GCAGAATGCA AGGAATGATG TCTTAAGAAA AGCGGCTAAT
ATGGTTATGA ACGGCAAAGG TAATGAGAGT CAACAGGAAG CTCAACGTTC GGAGGATCTA
TCGAACAATC AAGGAGAAGA CAATATACCT GGGTTTGAGC TGACGGAGGA AGAACTCCCG
TTCTAA
|
|---|
| Protein sequence | MTKKLMELEQ RENINASISI LGSVDIAQVQ QILTSIEKFQ MVVQKTLNEG HDYDIIPGTS
KPSLLKPGAE KILVLLGLTS EYEIIEKIEN YEKGIFAYTV RCILSKNGKK VTEGLGSCNS
KEDKYRWRWV SEKDLPPNVD KDMLKSKTNE YGQKLYRIEN DEIFTQANTI LKIAKKRAQI
DAVLTVAALS EIFTQDVEDM QEFLQNEQLE TMKAEEAVNV KVTFGKHKGK TLGEIYSQAP
DYVQWLAQNA RNDVLRKAAN MVMNGKGNES QQEAQRSEDL SNNQGEDNIP GFELTEEELP
F
|
|---|
| |