| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2429 |
|---|
| Symbol | |
|---|
| ID | 4808145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2901970 |
|---|
| End bp | 2903040 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640107843 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001038824 |
|---|
| Protein GI | 125974914 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | [TIGR02872] sporulation integral membrane protein YtvI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TATTACGGAA AAAGCAGAAA AAGGCAATAA TCAGCCTCAT CCTTGCATTT
ACATTACTGT TTGCTATTTA TATAATCATG AACTATTTCC TGGCTCTCAT TCTGCCTTTT
TTAATTGCCG TAATAATCTC TTCCGTCAAC GAACCTGTTA TCAGTTACAT GGAAACAAAG
CTAAGGCTTA ACAGAAAAAT TGCCTCAGTT ATATCCATCA TTATGACGGT AAGCATAATT
ATCATCTTAA TTTCTTTATG CATATTTAAA GTATACTATG AACTGGTAAA GCTTAACTCC
AATCTCCCCT ACTACATGGA ATCTTTTTCA GCCACCGCAT CGGCTTGTTA CGACCGCATG
AGCGTTTTTT ATTATCATCT TCCGAAGGGT TTGGCCGATA TTTTGGAAAA CAACTTTAAA
TCATTGCTAC CGAAACTTGA GACCATAACC GGCAAAATTG CAGAATCAAT TATAAGCAGC
ATTGCATCAA TACCCAAAGC TGCGGTCTTT ACCGCTGTAA CTCTCCTGTC TTCCTATTTT
ATAAGCAGTG ACCGAAAAAA GATCAGAAAC TTTATTTACA GGCAGCTTCC CGTAAATCTA
AAACAAGGTT TTATCGGGAT TAAAAGCGAT GCCATTTCAA CAATAGCCGG ATACATAAAG
GCACAGCTCA TCCTTATGTC CATCACCTTC ATTGAAACAA CTTTGGGTCT TATCGTCATA
AAATGTGAAT ATGCAGTGCT AATCGGGTTT ATCGCCGCAA TTGCCGATGC ACTGCCCATC
GTGGGAACGG GCATTGTTCT GTTTCCGCTT ATTGGCTGGA ACATTATTAC AGGAAACATT
CAAATAGCTT TAGGCATAAC CGCCGTATAC CTTTTAGGAG TGATTTTAAG GCAAATAATC
GAGCCGAAAA TAGTTTCAAG CCAGACAGGA ATTCATCCCT TTGCCACTCT TGTATCCATG
TATTTGGGAA TGACACTTTT TGGTTTTCCG GGACTTTTCA TAGGCCCCAT ATTTGTAACA
ATTTTAAAAA GCCTCCACAA GTCCGGCCTT ATAAGCGTAT GGGATGATTA A
|
|---|
| Protein sequence | MNFLLRKKQK KAIISLILAF TLLFAIYIIM NYFLALILPF LIAVIISSVN EPVISYMETK
LRLNRKIASV ISIIMTVSII IILISLCIFK VYYELVKLNS NLPYYMESFS ATASACYDRM
SVFYYHLPKG LADILENNFK SLLPKLETIT GKIAESIISS IASIPKAAVF TAVTLLSSYF
ISSDRKKIRN FIYRQLPVNL KQGFIGIKSD AISTIAGYIK AQLILMSITF IETTLGLIVI
KCEYAVLIGF IAAIADALPI VGTGIVLFPL IGWNIITGNI QIALGITAVY LLGVILRQII
EPKIVSSQTG IHPFATLVSM YLGMTLFGFP GLFIGPIFVT ILKSLHKSGL ISVWDD
|
|---|
| |