| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2258 |
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| Symbol | |
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| ID | 4809996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2686455 |
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| End bp | 2688464 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640107664 |
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| Product | phosphoesterase, RecJ-like protein |
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| Protein accession | YP_001038653 |
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| Protein GI | 125974743 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3887] Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0125063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGTA AAAAATTTAT TGGGATGTTT TTACCAAAAT CAAGTTTTTA TCTGCTGATT
ATATTTTTTC TATTGATAAT TATTTCAATT CTGGAATTTA CGGTTGCCAT ACCGGGCTAT
GCGTTGTTTT TGCTGCTTTT ATATTACAAC TTTCGGACAA ATTACAAGAG ACACAAGGAA
ATAACCCGAT ATATTGAAAA TTTGACATTC AATATAAATA CGGCGTCAAA GGATACGCTG
CTCAATTTCC CCATGCCTTT GGTTTTGATT GAGCTGGACG GGACAATTAT CTGGTATAAT
TCGTCTTTTA AAAAAATCTT TGACGGGGAG AAACTTTTAG AGAAGACAAT ACATTCATTT
ATAAAAGAAT TGAATCCTGA TGAACTGTCC AACGGGAACG TGAACTTTAG CAAGGATATT
GTGATAAACG GAAGAAACTA CTGTGTATTG GGCAATTTCG TGAAGGTGGA CAGCAAAATA
AATGAAGACG GGTTCATAAT ACTTATGTAT TTTGTGGACA ACACGGAACT GGTGGAACTT
AGGAAAAAGT ATGAAAATGA AAGAGCAACG GTGGGAATTA TCATAATAGA CAATTATGAT
GATTTGATGC AGAGCCTGGA AGATACGATA CGCACCCAAA TTCTTGCGGA AATAGATGCG
AAGATAACCC GGTGGATGGG ATATACCAAC GGTATACTTA AAAAATTTGA AAGGGATAAA
TATATACTCA TTTTCGACTA TAAGTATCTT AAGGATTTTG AAGAGAAAAA GTTTGACATC
CTGGATTCCG TCAAGGAAAT AAATGTGGGG AACAAGATTC CCGTTACGCT GAGTATTGGA
ATAGGTGTAG GAACGGATTC GCTGCTGGAG AAGTTCCGTT TTGCCCGCGC ATCTTTGGAC
ATTGCGTTGG GAAGAGGCGG CGACCAGGTG GTTGTAAAAA ACGGGGAAAA TATATCTTTC
TTCGGAGGAA AGACCAGGGA GCTGGAGAAA AGAACGAAAG TTAAAGCAAG GGTTATTGCC
TACGCATTGA GGGAGCTTAT TGACCAGGCC TCGGACGTAA TGATAATGGG GCATGAGAAC
TGTGACATTG ACTGTCTGGG AGCGGCTCTG GGAATATACA GGGTGGCAAA GAACAGAAAC
AAGGAGGCCC ATATAGTTTT AAACAGCTCA AATCCTACAA TAGATGTTTT GATATCAAAA
ATTGAAAAAA GCGGAGATTA TGAAGGCCTG TTTATAGCAA AGGAAGAAGC CATTGAGAAA
ATCAGTAAAA AGACACTCTT GATTATTGTG GATACCCACA GGCCGAGTTT TACCGAGTTT
CCGGAGCTTT TAAAATATAC GGATCAGATA GTGGTTATAG ACCATCACAG AAGAGGTGCG
GATTATCTTC AGGAGGCGGT GCTTACCTAT CAGGAAACTT ATGCCTCATC CACATGCGAG
CTGGTTACAG AGATACTTCA ATATGTGGAG GAAAAAATAA AGCTTGCGCC TGTTGAAGCT
GAAGCCCTGT ATGCCGGAAT AGTGGTGGAT ACCAAGAATT TCACATTCAA GACGGGAGTG
CGCACTTTTG AGGCAGCGGC TTTCTTAAGA AGACACGGGG TTGACACTGT TTCGGTAAGG
CAGATGTTCC AAAGTGACAT TAATACCTAT ATAAACATTT CCAATGTGGT AAGGGAAGCG
GAAATAGTAA GGGACAACGT GGCAATATCC GTTTGCCCGC AGAATGTGAA AAATGTTACA
TTGATTGCCG CCCAGGCGGC AGACCAGCTT GTTAATTTGG CAGGACTTAA TGCGGCTTTT
GTACTGAGCC ATATTAACAG CGGAGTTGCC ATTAGCGGAA GATCCCTGGG GGATGTGAAT
GTTCAGGTAA TCCTTGAAAA GCTTGGAGGC GGGGGCCATA TGACGGTTGC CGGAGCCCAG
CTTCAGGGAG TGACGGTTGA AGAGGCAAAA GCAAAACTTG TTGGAGCGAT TGATGAATAT
TTTGTTGAAA TCAACAGACA AAACGCATAG
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| Protein sequence | MESKKFIGMF LPKSSFYLLI IFFLLIIISI LEFTVAIPGY ALFLLLLYYN FRTNYKRHKE
ITRYIENLTF NINTASKDTL LNFPMPLVLI ELDGTIIWYN SSFKKIFDGE KLLEKTIHSF
IKELNPDELS NGNVNFSKDI VINGRNYCVL GNFVKVDSKI NEDGFIILMY FVDNTELVEL
RKKYENERAT VGIIIIDNYD DLMQSLEDTI RTQILAEIDA KITRWMGYTN GILKKFERDK
YILIFDYKYL KDFEEKKFDI LDSVKEINVG NKIPVTLSIG IGVGTDSLLE KFRFARASLD
IALGRGGDQV VVKNGENISF FGGKTRELEK RTKVKARVIA YALRELIDQA SDVMIMGHEN
CDIDCLGAAL GIYRVAKNRN KEAHIVLNSS NPTIDVLISK IEKSGDYEGL FIAKEEAIEK
ISKKTLLIIV DTHRPSFTEF PELLKYTDQI VVIDHHRRGA DYLQEAVLTY QETYASSTCE
LVTEILQYVE EKIKLAPVEA EALYAGIVVD TKNFTFKTGV RTFEAAAFLR RHGVDTVSVR
QMFQSDINTY INISNVVREA EIVRDNVAIS VCPQNVKNVT LIAAQAADQL VNLAGLNAAF
VLSHINSGVA ISGRSLGDVN VQVILEKLGG GGHMTVAGAQ LQGVTVEEAK AKLVGAIDEY
FVEINRQNA
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