Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2215 |
Symbol | |
ID | 4811080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2643920 |
End bp | 2644867 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640107621 |
Product | Mg2+ transporter protein, CorA-like protein |
Protein accession | YP_001038610 |
Protein GI | 125974700 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0598] Mg2+ and Co2+ transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00295785 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAA TATACAAATC CTATGATACA GACTTGTTTC CCGTTAAAAT TGACAGCTTT GAGAAAGGGT GCTGGATAAA TATTGTTTCT CCCACAGAGC AGGAATTGAA TTTCGTTGAA ACCAGTCTTA ACGTATCCTC CAATTTTTTA AGGGACCCTC TTGATGAAGA GGAAAAACCA AGAATAGATG TTGAGGACAA CCAGACCCTG GTAATTGTTG ACGTTCCGTA TGTATATGAG GAAGACAGAG ATATAAAGTA TGAGACCATA CCTTTGGGTA TTATCATATT GGAAGATTAT TTTATTACCA TATGCAGCAA GGAAACTTTT TTGATTCAAT ACTTCAAGGA CAAAAAAGTA AAAGATTATT TTACTTTTAA AAAGACAAGA TTTACCCTGC AAATTTTGTA TTTGATTGCA AAAGACTTCT TAAAGTACCT GAGGCATATT GACAAAAAAT CGTATGAGGC GGAGACTTCC CTGCACAAGT CTCTTCAAAA CAAGGAGCTT TTTAAACTGC TTGAATTGGA AAAAAGCCTT GTGTTTTTCA CTACATCTTT AAAATCAAAT GAGATAGTTA TGGAAAAACT TTTAAAAGGC AAATATATAA AACTTTATGA AGAAGACCAG GACCTTCTTG AAGATGTAAT CATAGAGAAC AAGCAGGCTA TTGAAATGGC CAACATTTAC AGCTCTATTC TGAGCGGAAC AATGGATACT TTTGCCTCAA TAATATCAAA CAACCTGAAT GTTGTGATGA AGGTTTTGAC TTCTATAACC ATAATAATGG CCATACCCAC CATGATAGCC AGTTTCTTCG GTATGAACGT ACAAATGCCT TTTGGCCTTG ATACCAATAA TCCCTATGCC TTTTGGGGGA TACTTGGGAT TTCTGCGGTT ATTTCCGTTG CCGCGGGAAT ATTCCTTTAC AAAAAAGACA TGTTTTAA
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Protein sequence | MIEIYKSYDT DLFPVKIDSF EKGCWINIVS PTEQELNFVE TSLNVSSNFL RDPLDEEEKP RIDVEDNQTL VIVDVPYVYE EDRDIKYETI PLGIIILEDY FITICSKETF LIQYFKDKKV KDYFTFKKTR FTLQILYLIA KDFLKYLRHI DKKSYEAETS LHKSLQNKEL FKLLELEKSL VFFTTSLKSN EIVMEKLLKG KYIKLYEEDQ DLLEDVIIEN KQAIEMANIY SSILSGTMDT FASIISNNLN VVMKVLTSIT IIMAIPTMIA SFFGMNVQMP FGLDTNNPYA FWGILGISAV ISVAAGIFLY KKDMF
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