Gene Cthe_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2215 
Symbol 
ID4811080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2643920 
End bp2644867 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content35% 
IMG OID640107621 
ProductMg2+ transporter protein, CorA-like protein 
Protein accessionYP_001038610 
Protein GI125974700 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00295785 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA TATACAAATC CTATGATACA GACTTGTTTC CCGTTAAAAT TGACAGCTTT 
GAGAAAGGGT GCTGGATAAA TATTGTTTCT CCCACAGAGC AGGAATTGAA TTTCGTTGAA
ACCAGTCTTA ACGTATCCTC CAATTTTTTA AGGGACCCTC TTGATGAAGA GGAAAAACCA
AGAATAGATG TTGAGGACAA CCAGACCCTG GTAATTGTTG ACGTTCCGTA TGTATATGAG
GAAGACAGAG ATATAAAGTA TGAGACCATA CCTTTGGGTA TTATCATATT GGAAGATTAT
TTTATTACCA TATGCAGCAA GGAAACTTTT TTGATTCAAT ACTTCAAGGA CAAAAAAGTA
AAAGATTATT TTACTTTTAA AAAGACAAGA TTTACCCTGC AAATTTTGTA TTTGATTGCA
AAAGACTTCT TAAAGTACCT GAGGCATATT GACAAAAAAT CGTATGAGGC GGAGACTTCC
CTGCACAAGT CTCTTCAAAA CAAGGAGCTT TTTAAACTGC TTGAATTGGA AAAAAGCCTT
GTGTTTTTCA CTACATCTTT AAAATCAAAT GAGATAGTTA TGGAAAAACT TTTAAAAGGC
AAATATATAA AACTTTATGA AGAAGACCAG GACCTTCTTG AAGATGTAAT CATAGAGAAC
AAGCAGGCTA TTGAAATGGC CAACATTTAC AGCTCTATTC TGAGCGGAAC AATGGATACT
TTTGCCTCAA TAATATCAAA CAACCTGAAT GTTGTGATGA AGGTTTTGAC TTCTATAACC
ATAATAATGG CCATACCCAC CATGATAGCC AGTTTCTTCG GTATGAACGT ACAAATGCCT
TTTGGCCTTG ATACCAATAA TCCCTATGCC TTTTGGGGGA TACTTGGGAT TTCTGCGGTT
ATTTCCGTTG CCGCGGGAAT ATTCCTTTAC AAAAAAGACA TGTTTTAA
 
Protein sequence
MIEIYKSYDT DLFPVKIDSF EKGCWINIVS PTEQELNFVE TSLNVSSNFL RDPLDEEEKP 
RIDVEDNQTL VIVDVPYVYE EDRDIKYETI PLGIIILEDY FITICSKETF LIQYFKDKKV
KDYFTFKKTR FTLQILYLIA KDFLKYLRHI DKKSYEAETS LHKSLQNKEL FKLLELEKSL
VFFTTSLKSN EIVMEKLLKG KYIKLYEEDQ DLLEDVIIEN KQAIEMANIY SSILSGTMDT
FASIISNNLN VVMKVLTSIT IIMAIPTMIA SFFGMNVQMP FGLDTNNPYA FWGILGISAV
ISVAAGIFLY KKDMF