Gene Cthe_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2054 
Symbol 
ID4810650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2443456 
End bp2444001 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content38% 
IMG OID640107459 
Producthypothetical protein 
Protein accessionYP_001038454 
Protein GI125974544 
COG category[L] Replication, recombination and repair 
COG ID[COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTTG TCAAATACAT GGTGAAAATT AATTTGATGA CTCCGTTTAA TATTTCCTCG 
GGACAAGAAA GAAGAGGCTC GGTACAAAGA AGAACGGTCC TGTGCAAAAA CAGACCTTAC
ATTCCCGGGA GCACAATAAA AGGGAAAATA AGGGATAATT TTTACAAAAT TACTGACCTG
AACCATACTG AAAATGATTG CAATTGTGTT ATGTGTACAA TATTTGGCGG GCAAGGTTAT
AAGCCTTCAA AAATATATGT GGATGATTTT CTGCCTGTTG AAAGTGAAAG CACGGAAAAT
AAAGATTTGG CTGTCAGATA TGGCATTGCA ATAAACAGGT ATTCAAAAAC CAATAAAGAT
AATCGTCTGT ATTCCCGGGA AGTAGCTACC GGAGGCAAGT TTTGCGGAAA TATAACGGTT
TATTTTGATG ATGAAACTAT TAGATACAAA AGAAACATAG AAATGGCAAT GAAAATGGTG
AACAGTATAG GAGGCGGGCA CAGCAAAGGA TTTGGCAGGG CTGAGGTTCA ATGGGAGGAA
GTTTAA
 
Protein sequence
MKVVKYMVKI NLMTPFNISS GQERRGSVQR RTVLCKNRPY IPGSTIKGKI RDNFYKITDL 
NHTENDCNCV MCTIFGGQGY KPSKIYVDDF LPVESESTEN KDLAVRYGIA INRYSKTNKD
NRLYSREVAT GGKFCGNITV YFDDETIRYK RNIEMAMKMV NSIGGGHSKG FGRAEVQWEE
V