Gene Cthe_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2009 
Symbol 
ID4810941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2388072 
End bp2388701 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content38% 
IMG OID640107421 
Producthypothetical protein 
Protein accessionYP_001038416 
Protein GI125974506 
COG category 
COG ID 
TIGRFAM ID[TIGR01443] intein C-terminal splicing region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.129716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTAT ATATAAAAGA TACAGGTTTC GTTAAAGAGA TGAAGCTGCA ACCAGGAAAC 
AGGTTGGTTG ATTCAAAAGG CAATGTTTTG GTGGTAGAAG AGAAAAAGCT TGAAATTACA 
GATGAATTTG TCAAGGTTTA TAACTTCAAG GTGAATGATT TTCACACATA TCATGTTGGT 
AATGATGGAA TACTGGTACA TAATGCAAAC TATAAAACAG AAACTGGCAA AATTGATATA 
GAAGTTAGTA AGTCTGATTT GGATCAATAT AGGCAAAGAC TGGGAGTATC TGAAACTCAT 
ACGGTAGCGG TTGGAAAAAC AGATGTACCA GGACTTGAGG GACAGACTTT TTGTGGAGCT 
TCACCGAAGG TTAGACAAGA AGCAGGACTT CCTAGCCTGG ATAAAATAGC ACCCAATCGT 
GAAATAAAAG CTCCTACAAA TGTTCCACTA AATAGAAACC ATGCAGAAGA AGAACTAATG 
CATGAATTTG TGGAAGCAGT TAAAAAAGCA GGATTAAAAC CGGATGAGGT CCGGGGGACA 
TTGAATATTA TCCAATCTAA CCCTAGAGGA GTATGTCCTA CGTGTTTACA AGAGCTGAGT 
GACCCTAACG TATCTCCGGG GTGTATTTAG
 
Protein sequence
MMLYIKDTGF VKEMKLQPGN RLVDSKGNVL VVEEKKLEIT DEFVKVYNFK VNDFHTYHVG 
NDGILVHNAN YKTETGKIDI EVSKSDLDQY RQRLGVSETH TVAVGKTDVP GLEGQTFCGA 
SPKVRQEAGL PSLDKIAPNR EIKAPTNVPL NRNHAEEELM HEFVEAVKKA GLKPDEVRGT 
LNIIQSNPRG VCPTCLQELS DPNVSPGCI