| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1973 |
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| Symbol | |
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| ID | 4810756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2353780 |
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| End bp | 2355303 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640107389 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_001038384 |
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| Protein GI | 125974474 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA ATGTAAAAGA TATAATAGCT GATTCGCATC TGGCTTTTCT AAACCAGGAA
AACGAAACGG CTTTAAGGCT GGCCAGACAG GCAATATCCC TGGCGCCGGA CAATCCTGAC
GCATACAGAT GCGCCGGAAA CGCTTGCATG TCATTGGACC GTTATGATGA GGCCATTGAG
TATTACAGGA CAGCTGTCAA ATATGATCCT GACAACGGCA ACAGGTATTA TGACCTTGGA
TTTGCGTTAG CTTCCGCTGA AAGATTTTCC GATGCCCTGA AAAATCTTGC GAAGGCAGAA
GAGTTAGGAT GTACTCCGGA AAATCTTGTT CAGCTTTACA ACTTGCTTGG AATCCTTTGC
TTTGATATTG GAAGGTACGA TGATGCTCTT GTAAATTTAA ACAAAGCGGA AAAGCTTATC
GGTATCGATG TTGACATTCT TAAGCGCAAA GCTGTTATAT ACGGTATCAA AAACGATATT
AAGAATGGAC TGATGACGGC AAATCAAATC AAACTGGTTA CTCCATCTGA ATATACCGGC
TATCAGATTG CATTTAAGTT GTTGGTTCAG GCAAAGCGTC TGGATGAAGC TGAGAAAGAG
TTGGAAAGAG CCAGAAAATA TGCATCACCG ACGATGGATT TCTATTTTGA CTACATGACT
CTTGAGCTTG AAAAGTATAA GACAGACAAT GACAAAGAAC ATTTTAAAAC TGCCCTTGGA
ATGATTGAAA AGGCTTTAAA AACGGTGAAA CCTACGGTGA AAGAAGTGGT TGAAAGTTAC
ATAAACGCAG CTGAGATATA TCTTCAGCTT GAAGACGCCG ACAGAGCCAT TGAGTGCCTT
AATGCTGCCC AAAATCCCAT CTGGGCTTAT AACAACGGGT TTGACGTGGT TGTAAGGAAC
TATGAGCCTG TTACTTTGAC GGAATATGAC ATCGAAGATA TGATTGAGGC TGACAGGAAA
AAGATAGAGG AACAGTTTGG AGATTATGGA TTTGAGGAAA TGGTTGAGAG TATCGAACCT
GATGAGGAAG GCAACAGGGA TTATTTAACT GTAATCGAAG ATGAAGTGAA AAGTGATGCA
AAGGAAGACT CAGAAGTATA TAAACTTGAT GAGTCCGAAA AGGTTGAATA TTCTTCTGAT
AATATAGATC AGATAAACAG GCTTTATGTA GGAGCGTACA CAGTAAAGAA AGATTTTGAA
AAAGTTATTG AATATTCCAG AAAATTACAA GCAAGTGAAA ACACATATAG TGTTTACCTG
GGCAAATATA CTGAAGCGAA TGCTATGAAG GAACTTGGTT TACCGGACTT TGCGGCAAAA
TATGAAGAAA TAATCAAATT TTTCAGAAAT GCTATGATTA AAGACCCTAC GGATCTGACT
GCTGTTACTT TCAGAGTCCA GTGCTACATT GACATTGGGC AGTATGATGA GGCCGAACAG
CTTTGCAGCC TTTTGACGAA GGAAGTGAGA AATTCATTTA TGGAAAAGAT TAAAAAAGCG
AAGTCCGGAG GTGAGCAGCA TTGA
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| Protein sequence | MNINVKDIIA DSHLAFLNQE NETALRLARQ AISLAPDNPD AYRCAGNACM SLDRYDEAIE
YYRTAVKYDP DNGNRYYDLG FALASAERFS DALKNLAKAE ELGCTPENLV QLYNLLGILC
FDIGRYDDAL VNLNKAEKLI GIDVDILKRK AVIYGIKNDI KNGLMTANQI KLVTPSEYTG
YQIAFKLLVQ AKRLDEAEKE LERARKYASP TMDFYFDYMT LELEKYKTDN DKEHFKTALG
MIEKALKTVK PTVKEVVESY INAAEIYLQL EDADRAIECL NAAQNPIWAY NNGFDVVVRN
YEPVTLTEYD IEDMIEADRK KIEEQFGDYG FEEMVESIEP DEEGNRDYLT VIEDEVKSDA
KEDSEVYKLD ESEKVEYSSD NIDQINRLYV GAYTVKKDFE KVIEYSRKLQ ASENTYSVYL
GKYTEANAMK ELGLPDFAAK YEEIIKFFRN AMIKDPTDLT AVTFRVQCYI DIGQYDEAEQ
LCSLLTKEVR NSFMEKIKKA KSGGEQH
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