Gene Cthe_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1557 
Symbol 
ID4810064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1885757 
End bp1886578 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content44% 
IMG OID640106975 
ProductABC transporter related protein 
Protein accessionYP_001037976 
Protein GI125974066 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAC TGACGCTGTG CGAAATGGGT GTTATGGATG ATTATATTCA GATTTCGGGC 
TTACATAAAA CCTTCCACAC ACGCAGCGGC CCGATTCAAG TACTTAAGGG AATTGATTTA
ACGGTGCGGA AGGGTGAGAT ATTTGGGATT ATAGGATTCA GCGGCGCAGG GAAATCCACA
CTTGCCCGAT GCATCAACCG GCTTGAAACA CCGGATTCAG GCAGTATCAA AGTGGGAGGT
GTTGAAATAC TCAACCTTTC AAAAAAGCAG CTGCTGCAAG AGAGAAAAAA GATTGGCATG
ATTTTTCAAA CCTTTAATTT GTTTGAAGCC AAAACCGTTT ATCATAACAT TTCCTACCCG
CTGGAAATAA GCAAAATCCC GAAACCGGAA ATTCGCAAGA GAGTTCTGGA AACAGCCGAA
CTTGTCGGTT TGTCCGATAA GCTGAATGCT TACCCGGGAG GATTATCCGG AGGTCAAAAG
CAACGTGTAG GAATTGCCCG GGCATTGGTT AGCCGTCCGA ATCTTTTGAT AAGCGATGAA
GCAACCTCTG CCCTTGATCC TCAGACTACT CTGCAAATTC TGGATTTACT TAAAGAAATT
AATCGAACTA CCGGTATTAC CATTTTAATG ATTACCCACG AACTGGATGC CATTCGATAT
ACCTGTGATC GGATGGCTGT TCTGGAAGAC GGTAAAATCA TTGAAGTGGG AACCGTTCGG
GAAATTTTTA ACAACCCCCT TAGCCGTACT GGAGCCCTGT TCACTAAGGT ATTTACCGAA
TTTCAGCGGA TAACGGAATT TGAAAACGGT AGTGGTATTT AA
 
Protein sequence
MSKLTLCEMG VMDDYIQISG LHKTFHTRSG PIQVLKGIDL TVRKGEIFGI IGFSGAGKST 
LARCINRLET PDSGSIKVGG VEILNLSKKQ LLQERKKIGM IFQTFNLFEA KTVYHNISYP
LEISKIPKPE IRKRVLETAE LVGLSDKLNA YPGGLSGGQK QRVGIARALV SRPNLLISDE
ATSALDPQTT LQILDLLKEI NRTTGITILM ITHELDAIRY TCDRMAVLED GKIIEVGTVR
EIFNNPLSRT GALFTKVFTE FQRITEFENG SGI