Gene Cthe_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1514 
Symbol 
ID4810552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1838700 
End bp1839578 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content38% 
IMG OID640106934 
Producthypothetical protein 
Protein accessionYP_001037935 
Protein GI125974025 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000671391 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTACA AAATAGACGC TGATACAATT GAATCTTTGA AAAAAGCTCA AAAAAATGAA 
ATCACAGAGT ACCACATTTA TTCAAAACTA TCCTCATTCA TAAAAAATGA ACACAACAGC
AAAGTTCTTA AACAAATCGC CCAGGACGAA CTATCCCACC ATAACGAGTT AAAAAAGTTT
ACAGGAACGG ATATGAAGCC AAATATTTTG AAAATATACT TTTATACCTT CATTTCATTG
ATATTTGGCA TTACTTTTGG TATAAAGCTC ATGGAAAAAG GGGAAAGCGG CGCTGAAAAA
CTATACAGGG AACTTGGGAA TAAAATTGAG GAATTTAAAA CAATAGCAAA AGAAGAAAAC
AAACATGAAG AAGAACTGAT TGAAATAATC GAGGAGGAAA AGCTTCAATT TGTAGGTTCA
ATGGTCCTGG GCTTAAATGA CGCCCTGGTG GAGCTTACCG GCACCCTGGC AGGCCTCACA
TTTGCATTAA AGAATACGCG CCTCATAGCA CTTTCAGGCC TTATAACAGG TATAGCGGCC
ACCCTTTCAA TGGCGGCATC CGAATATCTT TCAGCCAGAA CAGAGCAGGA GAGCAGCCGT
GCCCTTAAAT CATCATTATA TACCGGAGGA GCATATGTTT TCACCGTTGC ATGCCTGGTA
TTTCCCTACC TTTTATTTTC CAACTATGTG CTAAGTCTGG TGCTTACAAT TATTATGGCA
ATATTAATAA TACTTGTTTT CAATTTTTAT ATATCAGTAG CCAAGGATCT TCCCTTTAAA
CAGAGATTCT TTGAAATGGC CGGCATCAGT TTGGGAGTGG CAGTTATTTC CTTCATAATC
GGGCATTTCG TCAGGCTGTT CCTTGGAGTT GATGTTTAA
 
Protein sequence
MNYKIDADTI ESLKKAQKNE ITEYHIYSKL SSFIKNEHNS KVLKQIAQDE LSHHNELKKF 
TGTDMKPNIL KIYFYTFISL IFGITFGIKL MEKGESGAEK LYRELGNKIE EFKTIAKEEN
KHEEELIEII EEEKLQFVGS MVLGLNDALV ELTGTLAGLT FALKNTRLIA LSGLITGIAA
TLSMAASEYL SARTEQESSR ALKSSLYTGG AYVFTVACLV FPYLLFSNYV LSLVLTIIMA
ILIILVFNFY ISVAKDLPFK QRFFEMAGIS LGVAVISFII GHFVRLFLGV DV