Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1514 |
Symbol | |
ID | 4810552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 1838700 |
End bp | 1839578 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640106934 |
Product | hypothetical protein |
Protein accession | YP_001037935 |
Protein GI | 125974025 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000671391 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATTACA AAATAGACGC TGATACAATT GAATCTTTGA AAAAAGCTCA AAAAAATGAA ATCACAGAGT ACCACATTTA TTCAAAACTA TCCTCATTCA TAAAAAATGA ACACAACAGC AAAGTTCTTA AACAAATCGC CCAGGACGAA CTATCCCACC ATAACGAGTT AAAAAAGTTT ACAGGAACGG ATATGAAGCC AAATATTTTG AAAATATACT TTTATACCTT CATTTCATTG ATATTTGGCA TTACTTTTGG TATAAAGCTC ATGGAAAAAG GGGAAAGCGG CGCTGAAAAA CTATACAGGG AACTTGGGAA TAAAATTGAG GAATTTAAAA CAATAGCAAA AGAAGAAAAC AAACATGAAG AAGAACTGAT TGAAATAATC GAGGAGGAAA AGCTTCAATT TGTAGGTTCA ATGGTCCTGG GCTTAAATGA CGCCCTGGTG GAGCTTACCG GCACCCTGGC AGGCCTCACA TTTGCATTAA AGAATACGCG CCTCATAGCA CTTTCAGGCC TTATAACAGG TATAGCGGCC ACCCTTTCAA TGGCGGCATC CGAATATCTT TCAGCCAGAA CAGAGCAGGA GAGCAGCCGT GCCCTTAAAT CATCATTATA TACCGGAGGA GCATATGTTT TCACCGTTGC ATGCCTGGTA TTTCCCTACC TTTTATTTTC CAACTATGTG CTAAGTCTGG TGCTTACAAT TATTATGGCA ATATTAATAA TACTTGTTTT CAATTTTTAT ATATCAGTAG CCAAGGATCT TCCCTTTAAA CAGAGATTCT TTGAAATGGC CGGCATCAGT TTGGGAGTGG CAGTTATTTC CTTCATAATC GGGCATTTCG TCAGGCTGTT CCTTGGAGTT GATGTTTAA
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Protein sequence | MNYKIDADTI ESLKKAQKNE ITEYHIYSKL SSFIKNEHNS KVLKQIAQDE LSHHNELKKF TGTDMKPNIL KIYFYTFISL IFGITFGIKL MEKGESGAEK LYRELGNKIE EFKTIAKEEN KHEEELIEII EEEKLQFVGS MVLGLNDALV ELTGTLAGLT FALKNTRLIA LSGLITGIAA TLSMAASEYL SARTEQESSR ALKSSLYTGG AYVFTVACLV FPYLLFSNYV LSLVLTIIMA ILIILVFNFY ISVAKDLPFK QRFFEMAGIS LGVAVISFII GHFVRLFLGV DV
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