Gene Cthe_1455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1455 
Symbol 
ID4810605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1775009 
End bp1775683 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content43% 
IMG OID640106876 
Producthypothetical protein 
Protein accessionYP_001037877 
Protein GI125973967 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0000773968 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAG TGCAGAAAAG ATTATTTGAG GTGGCAGACA AACAGTATGC CCTGTTTCAG 
GCAAAGCTGA TACCAAATAT TCCGCAGGAG AGGGTTATAG GTGTTCGGGT TCCGGTGTTA 
AGGAAAATTG CCAGGGAATT TGAAAAAGAG CCGGAATGCC GTGATTTTCT GAATACTTTG 
CCGCATGCAT ATTATGACGA AAACATGCTT CATTCCATTT TGCTAAGCAA TGTGAAGAAC 
TATGAGGAGT GCATTGCCGC AGTTGAAGCT TTTCTTCCGT ATGTTGATAA CTGGGCGGTG 
TGCGATACGC TCAGACCGAA AGTATTCGGC AAGCACAAGG ACAAGCTTCT TCCCAGAATC 
AAAGATTGGA TTGCTTCCGA TAAAACATAC ACTTGCCGTT TCGGAATAGG TATGCTGATG 
ATGCATTATC TGGATAAGGA TTTTAAGCCG GAGTACCTGG AGCTTCCCCA AAAGGTTGAC 
AGTGAAGAAT ATTATGTGAA AATGATGATC GCATGGTTTT ATGCCACGGC TTTGGCAAAT 
CAGTGGGATG CGACGATTCC GTATATTGAA GAGCATAGAC TTTCTGACTG GGTACATAAA 
AAGACGATTC AAAAAGCCTG CGAAAGCTAT CGTATAACGG ATGAGCAAAA GGCGTATCTG 
AAGACATTAC GATAA
 
Protein sequence
MTKVQKRLFE VADKQYALFQ AKLIPNIPQE RVIGVRVPVL RKIAREFEKE PECRDFLNTL 
PHAYYDENML HSILLSNVKN YEECIAAVEA FLPYVDNWAV CDTLRPKVFG KHKDKLLPRI 
KDWIASDKTY TCRFGIGMLM MHYLDKDFKP EYLELPQKVD SEEYYVKMMI AWFYATALAN 
QWDATIPYIE EHRLSDWVHK KTIQKACESY RITDEQKAYL KTLR