Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1382 |
Symbol | |
ID | 4809377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1686930 |
End bp | 1688054 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106806 |
Product | patatin |
Protein accession | YP_001037807 |
Protein GI | 125973897 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGAG ACATAAAGCT TGCAAATCTC GTGTTGGGAG GCGGAGGAGT ATTAGGAATT GCATATATAG GAATGCTTGA AGTGGCAGAG GAAAGAGGAT TCTATTTTAA AAATATAGCA GGAGTGTCGG CAGGTGCTCT GGTAGGGGCT TTTATAGGTG CCGGATACAA TTCCTGTGAA TTAAAAAGAA TTTTGGACGA GTTTGATTTT AATAAAATGA AACTTTCGGA TATTTCCCGG GAAATACCGG TGGTAAAAAA ATATATGGAA TATAGCTTAA GCAGTGCATT TCGGGGGAAT AAAAGTTTTA AAGATTTTCT GAATATGCCT GTTATGGACC GGGGAAAACA TTACAGTTCT GAAAACAATG GCGAGTTTGT TGAAGTGGAT GAGGAGTTTA CCGGATACAG AAGAAACCTT CTGAAGAATA TTGTAACTTA CAGTAAAGAA GGATGCCTTT TTGACGGAGA CTATCTTGAA GAATGGGTGT ATAAAACTTT AAAAAGAAAA GGTATAAAGA CCTTTGCGGA TTTAAGAGGG GGCAGAACAG ACCGGACAAA TCCAAATGGA TACAAAGTCA GAATGACGGC TGTTGATGCA AATCGCGGAA GAATAGTGGT TCTTCCGGAC GATATTTCCT ATTACGGCAT TGATCCGGAT CGGCTTGAGG TTGCAAAAGC AGTGAGGATG AGTACCAGTG TTCCTTTTGC TTTTAAGCCA GTGGAAGTCT TGAAAAAGGA CGGAGGCAGT GTAAAGAAGC ATTACCTGGT TGACGGCGGT GTATTGGATA ATTTGCCCGT ATGGCTTATT CAACCTTCAA TGGCAATTCC GCTTATTGTC TGCGAGCTAA AGGGAAGGGA TAAACTGTTT AGTATTATGA CGCCTCTTAA CATCCTGAAA GGCCTTGTAT CCGCCGTGCA TGATTTCGGC ATCCCGAACA TAAAGCATTA CAAGAATAGT TATCTTGTAA GAATATATAC CGGGGATATT TCTTTTCTGG ATTTTGAACT GAGCGAGAAG GACAAAAAAT TTCTGATTGA TTCGGGAAGA ATAGCTGCGC TTTGCACCTT AAGAAAAGTT TACCGGAGAA AATATATCCA AAGATATGCT GCTTTTTATT TTTAA
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Protein sequence | MDRDIKLANL VLGGGGVLGI AYIGMLEVAE ERGFYFKNIA GVSAGALVGA FIGAGYNSCE LKRILDEFDF NKMKLSDISR EIPVVKKYME YSLSSAFRGN KSFKDFLNMP VMDRGKHYSS ENNGEFVEVD EEFTGYRRNL LKNIVTYSKE GCLFDGDYLE EWVYKTLKRK GIKTFADLRG GRTDRTNPNG YKVRMTAVDA NRGRIVVLPD DISYYGIDPD RLEVAKAVRM STSVPFAFKP VEVLKKDGGS VKKHYLVDGG VLDNLPVWLI QPSMAIPLIV CELKGRDKLF SIMTPLNILK GLVSAVHDFG IPNIKHYKNS YLVRIYTGDI SFLDFELSEK DKKFLIDSGR IAALCTLRKV YRRKYIQRYA AFYF
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