Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1340 |
Symbol | |
ID | 4809480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1630913 |
End bp | 1632040 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106764 |
Product | hypothetical protein |
Protein accession | YP_001037765 |
Protein GI | 125973855 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTAA TTCATCTTGT AATCGCTGAC AAGGATAGGG CTTATCTTGA CAGTTTGGTT GACTTCATTT ATTCAAAATA TAACAACAGA TTTTATGTTC AGGCTTTTTC CAACGAGGAT ACTTTTAACG ACTTTTTTAA TAAAACGGAC AAAATTGACA TACTTCTTAT AAGTCCGGAC TTTTACAGTG ATGAGCTTGA TTTGGAGAAG GTAGTTGCAC CCATTGTGTT GTCGGCCGGA ATTCTCACGA AAGATATAAA AAACTGTGAG ATAATCAGTA AATATCAAAT GGGCGACAAG CTTGTCGGCA ATATATTAAA TATTTTTTCC GAGAAAAGCA ATTGCGAGTT TATAACCGGT GACGGAAAAA AGAAGACTCG TTTTGTCACT TTTTATTCTC CATGCGGAGG GGCGGGTACA TCCACCTTGG CCGCAGGTGT GAGCGTCAAA TGTGTACAGA GCGGATTGAA CGCTTTTTAT CTTAATTTCG AAAAAATTGC CGCTACTACC GCTTATTTTG ATGCCCATGG CAGTGGAGAA AATCTTTCGA ATGTTTTGTT TTTCCTCAAG GAGAATAATA AAAACCTGGC GCTTAAAATA GAAGGAAGCA GATCCATAGA CAGCACAACG GGAGTTCATT ATTTTTTACC CCCGGAGAAC GTTTTTGACC TTGATGAGTT GACATCCGAT GAGATAAAGA GGCTTATAGG ACAGTTTAAG GCGATGGAGA GCTATGATGT GGTTATAGCT GATACAGGTT CGGAGTTAAA CAATGTCAGT ATATCGCTTC TGGAAAGCAG TGATTTGGTG TTCTGTGTTT TGCCTTGTGA TACTACGGCA AAGATTAAGC TGGCAACACT CCATAAAGCC TTTGATATTC TTAACAAGAG AAAAGGCTTG AACTTTGAGG ACAAGATGGA GCTTATACTG AACAAATGCC TGAACTTGGG ATCTTCTGAT GTTGAAAGTC TTACTTTGAA CGGAAAACCT GCTTCTGTCA GGATACCTTA CATAAAAGGA CTGGATGCAA GCTATGGCAT AGAGCACCTG ACAGAAGATT CCAACCCTCT TGGACAGGCT GTAAGGCAAA TAATTAGCAT ATTGCAGGGA AGTACGGGTG GTTGCTGA
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Protein sequence | MAVIHLVIAD KDRAYLDSLV DFIYSKYNNR FYVQAFSNED TFNDFFNKTD KIDILLISPD FYSDELDLEK VVAPIVLSAG ILTKDIKNCE IISKYQMGDK LVGNILNIFS EKSNCEFITG DGKKKTRFVT FYSPCGGAGT STLAAGVSVK CVQSGLNAFY LNFEKIAATT AYFDAHGSGE NLSNVLFFLK ENNKNLALKI EGSRSIDSTT GVHYFLPPEN VFDLDELTSD EIKRLIGQFK AMESYDVVIA DTGSELNNVS ISLLESSDLV FCVLPCDTTA KIKLATLHKA FDILNKRKGL NFEDKMELIL NKCLNLGSSD VESLTLNGKP ASVRIPYIKG LDASYGIEHL TEDSNPLGQA VRQIISILQG STGGC
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