| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1284 |
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| Symbol | |
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| ID | 4809536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1559794 |
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| End bp | 1561260 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640106707 |
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| Product | glycogen/starch synthases, ADP-glucose type |
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| Protein accession | YP_001037709 |
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| Protein GI | 125973799 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000203443 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGAGA ATCATAATTT GAAAGTATTG TTTGTTTCTG TTGAAGTTGC TCCATTTGCT
AAAACGGGAG GATTGGCAGA TGTAGCGGGT TCTTTGCCAA AGGCTTTGGT TTCCATGGGA
TATGACGTTA GGATTGCAAT GCCGAAGTAT CAGCAGATAG ATGCTGATAT GAGGTACGTG
ACGGATTTTC CGGTGGATAT GGGAGGAAGG CAGGCAACTT GTATAGTACG GGAAGGAGAA
ATCAGTTTCA AAGCAGACGG TAAGGATTTG AACGTGCCTG TTTATTTTGT GGACAATTAC
CACTATTTTA ATAGAGGCGG GATATATTGT TATTTTGATG ATGCAGACAG ATTTGCTTTC
TTCTGCAAGG CAACATTGGA TATGCTTCCG AAAATAGACT TCAAACCGGA TATAATTCAC
TGTAATGACT GGCATACAGG ACCTATCTGC ATGTTTTTAA ATGAGAAGTA TAAAAGTTAT
CCTTTCTATA AAAACATAAA GACCATGTTT ACAATTCACA ATCTTGAGTA TCAAGGTAAT
TTTTCAAGGG ATGTTTTAGG CATCATGGGA GTTTCCGATG AAGTATTTGT ACCTGAAAAA
GTCGAATTTT ACGGAATGTT CAGCTTTATG AAAGCCGGAC TGGTTTATGC GGATATTATA
ACCACGGTAA GTGAGACCTA TGCAAAAGAA ATTCAGACCG AAAAGTACGG TGAGAGGCTG
GAAGGTTTGC TGAGAAAACG GTCCAAAGAC CTTTACGGTA TTGTAAACGG TATAGACTAT
GATGTGTTCA ATCCCCAGAC CGACCCGGCG ATTTATAAAA ACTATAATGT TGAGACATTT
GAATTGAAAG TGGAAAACAA ATATGCTCTC CAGAAGGAAA TGGGACTTCC AAAAAAAGAT
GTGCCTGTTA TCGGGCTGAT ATCAAGGTTG ACCGGACAGA AAGGCTTAAA CCTTATAATG
GATGAAATTG ACGAGATGAT GAAGGAGGAT ATTCAGTTTG TCCTGCTGGG AGCCGGAGAT
GAATATTATG AGACAGGATT TAAGAAAATT CAGGAAAAGT ATCCTGACAA AGTGGGAGTG
TATATCGGGT TTAATGCGCC TTTGGCCCAG CGAATTTATG CGGGCAGTGA CATGTTCCTT
ATGCCGTCGA GATTTGAGCC TTGCGGACTT GGGCAGCTGT TTAGCCTGAG GTATGGTACC
ATACCCATAG TAAGGGCTAC AGGAGGATTG GCAGAGACGG TAATTGATAT AGACAAGGAC
AAGAAAAACG GAAACGGTTT TTCATATGAA GAGTTTTCAT CAAAGGATAT GTTAAAGACT
GTCAAGCGGG CGATAAAGTT TTACAATGAA AAGCCCGATG AATGGAAGGC TATGGTAAAG
CGTGCCATGA GTGCCGATTA TTCATGGAAC AACTCGGCAA GCAAATATTC AGATTTGTAT
ATGAAACTTA CAAAAAAGAA AAAATAA
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| Protein sequence | MRENHNLKVL FVSVEVAPFA KTGGLADVAG SLPKALVSMG YDVRIAMPKY QQIDADMRYV
TDFPVDMGGR QATCIVREGE ISFKADGKDL NVPVYFVDNY HYFNRGGIYC YFDDADRFAF
FCKATLDMLP KIDFKPDIIH CNDWHTGPIC MFLNEKYKSY PFYKNIKTMF TIHNLEYQGN
FSRDVLGIMG VSDEVFVPEK VEFYGMFSFM KAGLVYADII TTVSETYAKE IQTEKYGERL
EGLLRKRSKD LYGIVNGIDY DVFNPQTDPA IYKNYNVETF ELKVENKYAL QKEMGLPKKD
VPVIGLISRL TGQKGLNLIM DEIDEMMKED IQFVLLGAGD EYYETGFKKI QEKYPDKVGV
YIGFNAPLAQ RIYAGSDMFL MPSRFEPCGL GQLFSLRYGT IPIVRATGGL AETVIDIDKD
KKNGNGFSYE EFSSKDMLKT VKRAIKFYNE KPDEWKAMVK RAMSADYSWN NSASKYSDLY
MKLTKKKK
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