| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1172 |
|---|
| Symbol | |
|---|
| ID | 4810124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 1399482 |
|---|
| End bp | 1400630 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640106594 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001037597 |
|---|
| Protein GI | 125973687 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2006] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAG TGGCTCTAAT CAGATGTGAA AGTTATGACT ATGATGCCGT CAAATCAGCC
GTAAAAAGGG GGCTTGACCT TATTGGAGGC CCTCACCGGT TTGCCGCTCC CAATGAAAAA
ATACTCTTAA AACCCAATCT TCTTTCGGCA GACCCGCCGG AAAGATGCAG CACAACGCAC
CCTTCCGTAT TTAAAGCCGT GGCGGAAATA TTCATGGAGG CAGGAATAAC CAATCTTTCC
TACGGCGACT CCCCCGGCAT TCACAAGCCC ATAACCGCGG CGAGAAAAAA CGGAATTGAA
AAAGCTGCAA ATGAGCTTGG AATCAAACTT GCCGATTTCC TGGAAGGAAA GGAAGTGTTC
TTTGAAAACG CAATCCAAAA TAAAAAGTTT ATAATAGCAA ACGGTGTTCT TGAAAGCGAC
GGCATTATCA GTCTGCCCAA GCTAAAAACC CATGGATTTG CCAGAATGAC GGGTTGTGTG
AAAAACCAGT TTGGATGCAT ACCCGGACCT CTGAAAGGAG AATTTCACGT TCGGATTCCC
AGTATAATCG ATTTTTCAAA AATGCTGGTG GATCTTAACG TTTATTTAAA ACCTCGTCTT
TTTGTCATGG ACGGTATCAT AGCAATGGAA GGCAACGGAC CCAGAGGCGG GACTCCCAGA
AAAATAAATG CGATACTTCT TTCCGAAGAT CCAATTGCCC TGGATGCCAC TGTATGCAGA
ATGATAAATT TAAACCCCGA GTTTGTGCCT ACCATAGTAT TTGGAAAAGA AGCCGGCCTT
GGAACTTATG ACGAAAATGA AATTGAAATT CTCGGAGATG ATATTCAAAG CTTCATAACT
TATGACTTTG ATGTAAGAAG AGAACCTGTA AAGCCCTTCA AGCCCGGCGG AGCCATCCAG
TTTTTCAGAA ATTTCATCGT TCCAAAGCCC TACATTTTAA AAAACAAATG TATTAAATGC
GGAGTATGTG TAAATGCGTG TCCGGTAAAA CCAAAAGCAG TAGATTGGCA CAACGGAAAT
AAAAAAGAAC CTCCTACATA TATTTACAAA AGATGTATAA GATGTTACTG CTGTCAGGAA
CTTTGTCCGG AAAGCGCAAT CCACCTCAAG GTTCCTTTTA TTCGCAAATT TTTTTATAAT
CCGAAATAA
|
|---|
| Protein sequence | MSKVALIRCE SYDYDAVKSA VKRGLDLIGG PHRFAAPNEK ILLKPNLLSA DPPERCSTTH
PSVFKAVAEI FMEAGITNLS YGDSPGIHKP ITAARKNGIE KAANELGIKL ADFLEGKEVF
FENAIQNKKF IIANGVLESD GIISLPKLKT HGFARMTGCV KNQFGCIPGP LKGEFHVRIP
SIIDFSKMLV DLNVYLKPRL FVMDGIIAME GNGPRGGTPR KINAILLSED PIALDATVCR
MINLNPEFVP TIVFGKEAGL GTYDENEIEI LGDDIQSFIT YDFDVRREPV KPFKPGGAIQ
FFRNFIVPKP YILKNKCIKC GVCVNACPVK PKAVDWHNGN KKEPPTYIYK RCIRCYCCQE
LCPESAIHLK VPFIRKFFYN PK
|
|---|
| |