| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0873 |
|---|
| Symbol | trpD |
|---|
| ID | 4810491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1046690 |
|---|
| End bp | 1047727 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640106289 |
|---|
| Product | anthranilate phosphoribosyltransferase |
|---|
| Protein accession | YP_001037300 |
|---|
| Protein GI | 125973390 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA AAGCAATTTC AAAACTGGTT GAAGGGAAAA ATTTAAGTGA GTCCGAAATA
ATTGAGGCAT TGGACTGTAT CATGGAGGGC AAGGCAACAC CTGCCCAGAT AGGCAGTTTT
ATAACGGCGT TGAGAATCAA AGGGGAAACA ATTGAGGAGA TAACAGGTTG TGCGAAAGTA
ATGAGAGCAA AGGCTGACAA AATATGTCCG AATGTAGATT ATTATATTGA TACCTGCGGA
ACCGGGGGAG ACGGAACCAA CACCTTTAAT ATATCAACAG CAACGGCTTT TGTGGCAGCA
GCGGGAGGCG TATATGTGGC AAAACACGGA AACAGATCGG TATCAAGCAA GAGCGGAAGT
GCGGATGTTT TGGAAGCTTT GGGCGTCAAT ATTGACCTTG ATCCGGTTCA GGTAAAAGAG
TGTATCGAAA AGGTGGGAAT AGGATTTATA TATGCCCCGG TGTTCCATAA ATCAATGAAA
CACGCCGCGG GTCCCAGAAA GGAACTGGGA ATAAGGACAA TATTCAATAT ACTTGGCCCT
TTGACCAACC CTTCCAATGC AAAAGGGCAG GTGCTGGGAG TATTTAATCC AAATCTTACG
GAACTTATGG CAAACGTCCT TTTGAATCTT GGAATTGAAA GGGCTATGGT TATACACGGA
ATGGACGGCA TGGATGAAAT AACGACAACG ACTTCTACAA AAGTGTCGGA GGTACGGAAC
AATGAGGTTA TAACTTACGA ATTATTCCCG GAAAACTATG GTATTGCCCT TGCGTCGCCT
GAGGATTTGA CGGGAGGCAA TGCAGAGGAA AACGCTCAGA TAATCAGAAG GATATTTAAC
GGAGAAAAAG GACCTAAGAG AGACATTGTT GTGTTAAATT CAGCGGCGGC ATTATATGTA
GGAAAGGTTG TATCAAGCAT TGAAGAAGGT ATCGGCCTTG CCGAAGAAGT GATTGATTCC
GGAAAAGCTT TGCAAAAGCT TGACGAGTTT GTGGAATTTA CTAATTCATT TATAAGCTAT
AATGAAATGT CAGGCTGA
|
|---|
| Protein sequence | MLKKAISKLV EGKNLSESEI IEALDCIMEG KATPAQIGSF ITALRIKGET IEEITGCAKV
MRAKADKICP NVDYYIDTCG TGGDGTNTFN ISTATAFVAA AGGVYVAKHG NRSVSSKSGS
ADVLEALGVN IDLDPVQVKE CIEKVGIGFI YAPVFHKSMK HAAGPRKELG IRTIFNILGP
LTNPSNAKGQ VLGVFNPNLT ELMANVLLNL GIERAMVIHG MDGMDEITTT TSTKVSEVRN
NEVITYELFP ENYGIALASP EDLTGGNAEE NAQIIRRIFN GEKGPKRDIV VLNSAAALYV
GKVVSSIEEG IGLAEEVIDS GKALQKLDEF VEFTNSFISY NEMSG
|
|---|
| |