Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0667 |
Symbol | |
ID | 4810284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 821833 |
End bp | 823602 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106083 |
Product | GerA spore germination protein |
Protein accession | YP_001037095 |
Protein GI | 125973185 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGACT TAAAAAAACT GATTAAAGAC ATGTTTGTTT TCAAAGAGCC CGAACCTCGG GAAGAATTCA TATTGGAGGA AAAAGAGTCT GAAAAAATTG TTAATGTTAC GGACGCACAT GATGAAACTT CGGAAAAAAA GAAAAAAGGT TCGTTAAGAA ACCTTTTTTC AAAATCAGCC AATAGTGAAA AGAAAGACAG CGAGTCCGGC AAAGAAAGCA ACAACACGGA AAATATGACA TGTGTAAGCA AAAATCTTAA AGAAAATGTC GAGTATTTAA AGAAAAGGTT TTCAATTCCT ATTAATGGAG ATGTTGTTTT AAGAGAGTTT GATATTGTAA TAAAAGACAG GAAAATTCCC GCATGCCTTA TATTTTATGA CGGAATGGTT AACGGCATGC TCATAAATCT TAATATTCTG CAGCCCCTTA TGCTTCTTTC CAATTTGGAT GTAAAGGGCA AGAACGGGGA AAAAGACATT GCCGAGTATA TTCACAAAAG TCTGGTTACT CACAATCAGG TAAAAGTATC CCATGAGTTT GATGAAATTG TTGGAGAGAT TAATTTTGGC GGTTGCGGGG TTTTCATCGA CGGAATAGAT GTTGCCTATG CCTGTGATGT AAAGGGATGG CAGCACAGGG GAGTGGACAG GCCAAACAAC GAGATTGTTA TAAGAGGTCC GCAGGAAAGC TTCAATGAGA TACTCAGGGT AAACACCGCC CTTGTAAGGA AAATCTTAAA AGATGAAGAT CTTGTGGCGG AAAGCATAGA AATAGGAAAA AGAAGTAAAA CTCCTTGTTC ACTTTTGTAT ATAAAGGATA TTGCAAACGA GTCTTTGGTA AATGAAGTAA GAAGAAGGCT TCAAAACATA AAAACGGATT ACATATTTGA CACCGGTGAG CTGGAGCAGT ATATAGAGGA CAATACCCTA ATGTCCACTC CGCAAATAGT GGCCACGGAA AGACCCGACA GAGTGGCATC CATGCTTGCT GAGGGGAAAG TGGCTGTGAT TATGTCGGGA AGCCCATTTG CTCTGGTAAT GCCTACTACC AACAATGATT TCCTTCAATC GGCGGAAGAT GCTTATGTAA GGTTTCCATA TGCAAACCTG CTTCGGATAA TGAGGGTTAT AGCCATATTT ATGTCACTGC TTTTACCTGG GCTGTATGTG GCAATAACAA ATTATCATCA CGAAATGATT CCAACAGACC TTCTTTTTGC CATAGAAGCT TCCAGGGAAA GAGTACCGTT TCCATCGGTT GTGGAAATAA TCATAATGGA ATTTGCCTTC GAGCTTATTC GTGAAGCGGG TCTCAGAGTT CCAAGCCCCA TAGGTCCCAC CCTTGGCATA ATTGGGGCTC TGATACTCGG GCAGGCGGCA GTTGCGGCAA ATATTGTAAG CCCGATTCTT ATAATTGTAG TTGCGGTTAC CGGTATTGGG TCTTTTGCAA TACCAAACTT TTCGTTGGGA TTTTCTTTCA GGATTTTAAG ATTTGCCTAC GTTTTTCTAG CTGCTATGGC TGGCTTTTTG GGCATTACTT TTGGTTTGTT TGTGCAAAGC ATTATTTTGT GCAATGCAAA ATCTTTTGGA GTACCTTTTA TGGCGCCTTT TGGACCGAAA ACCAAGAGCC GTTTCCAGGA TCAGTTCTTC AGGTCGCCTA TTTGGAAGCA GGAAAAAAGG CCGGATTTTT TAAATACCAA AGATACTCAA AAGCAGCCTA AGATATCGCG GCAATGGAGA AAAAGCGAAA AGAAGAAAGG TAAGCAATAA
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Protein sequence | MADLKKLIKD MFVFKEPEPR EEFILEEKES EKIVNVTDAH DETSEKKKKG SLRNLFSKSA NSEKKDSESG KESNNTENMT CVSKNLKENV EYLKKRFSIP INGDVVLREF DIVIKDRKIP ACLIFYDGMV NGMLINLNIL QPLMLLSNLD VKGKNGEKDI AEYIHKSLVT HNQVKVSHEF DEIVGEINFG GCGVFIDGID VAYACDVKGW QHRGVDRPNN EIVIRGPQES FNEILRVNTA LVRKILKDED LVAESIEIGK RSKTPCSLLY IKDIANESLV NEVRRRLQNI KTDYIFDTGE LEQYIEDNTL MSTPQIVATE RPDRVASMLA EGKVAVIMSG SPFALVMPTT NNDFLQSAED AYVRFPYANL LRIMRVIAIF MSLLLPGLYV AITNYHHEMI PTDLLFAIEA SRERVPFPSV VEIIIMEFAF ELIREAGLRV PSPIGPTLGI IGALILGQAA VAANIVSPIL IIVVAVTGIG SFAIPNFSLG FSFRILRFAY VFLAAMAGFL GITFGLFVQS IILCNAKSFG VPFMAPFGPK TKSRFQDQFF RSPIWKQEKR PDFLNTKDTQ KQPKISRQWR KSEKKKGKQ
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