Gene Cthe_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0647 
Symbol 
ID4808176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp800999 
End bp801688 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content43% 
IMG OID640106061 
Productanaerobic ribonucleoside-triphosphate reductase activating protein 
Protein accessionYP_001037075 
Protein GI125973165 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02495] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTG CAGGGATACA TAAAAACTCC TTTGTGGATT TCCCAGGAAA AATAGCAATT 
GTTGTTTTCA CACCGGGCTG CAACATGAAT TGCTTTTACT GTCACAATAA AACACTGATT
TCCGGAGGCA ACGAGGAGTT TATTGATAAT GATGAGGTTC TTGAACTGCT TGTCAAAAGA
AGAGGATTTA TCGACGGCGT GGTTATAAGC GGAGGAGAGC CCACACTTCA GAAGGATCTG
GAAGGTTTTT TGGAAAAGGT CAAATCCCTG GGATATGCGG TAAAGCTGGA TACCAACGGG
ACAAATCCCC ATGTGGTTGA AAACCTTGTC CAAAATGGGC TGGTGGATTA TATTGCAATG
GACGTGAAAG CTCCTTTTGG CAAATATAAT GAAATTTGCC GCACAAACGT GGATGTTGAT
AGCATTAAAA AGAGCATTGA AATTATAAAA AGCGGCAAAG TAGACTATGA GTTCCGCACT
ACCGTTGCTC CGGGGCTTGA AATGGACGAT ATCTTTGAAA TAGCAAGAGG TATTGAAGGG
GCAAGACTGT ATGTCCTGCA GAAATATCGG GATGTGTCGG AAAGCGCTGT GAAGGACTTC
CGTAATCCTC AATTTCTGCT GGATGCGGCA GTAAGGATAA AAGGAATTGT TCAGAGAGTG
GAAACAAGAG GAGTGGCGTT TTGCGCTTAG
 
Protein sequence
MRIAGIHKNS FVDFPGKIAI VVFTPGCNMN CFYCHNKTLI SGGNEEFIDN DEVLELLVKR 
RGFIDGVVIS GGEPTLQKDL EGFLEKVKSL GYAVKLDTNG TNPHVVENLV QNGLVDYIAM
DVKAPFGKYN EICRTNVDVD SIKKSIEIIK SGKVDYEFRT TVAPGLEMDD IFEIARGIEG
ARLYVLQKYR DVSESAVKDF RNPQFLLDAA VRIKGIVQRV ETRGVAFCA