Gene Cthe_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0600 
Symbol 
ID4808202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp736260 
End bp736904 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID640106014 
Productthiamine biosynthesis protein ThiF 
Protein accessionYP_001037028 
Protein GI125973118 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID[TIGR02354] thiamine biosynthesis protein ThiF, family 2 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAT TTGAAATTGG GCTTATGTCT TATCTAGGCA GGGAAAAGCT TGAAAAGCTC 
GGTAAAGTAA AGGTGGGAAT CGCCGGGGCC GGAGGGCTTG GTTCCAATTG TGCATTGCAC
CTGGTGAGAA GCGGTTTTAA AAATTTAAAA ATAGTGGATT TTGACGTGGT GGAACCATCT
AATCTGAACA GGCAGTTTTT CTTCCTGGAT CAGTTGGGAC GTCCCAAGGT TTTGGCTCTA
AAGGAGAATT TGGCAAGAAT CAACCCTGAT GTAATGATAG AGGCTATACA GCAAAAAGTA
GACAGAAATA ATGCAAAGCA GCTGTTTGAT GACTGTGACG CTGTGGTGGA GGCTTTTGAT
AAAGTTGAGT GCAAAACCAT GATGGCGGAG GCTTTTGCCT CGTCGGGAAA ATTTTTTGTA
TGTGCATCGG GACTTGCCGG TTGGGGAAAC AGTGATGAAA TAAGAATACG AAAAGTACAT
GACAGGTTCT ATATAGTCGG GGATTTTGTT ACCGGAGTCA AAGAAGGCAT ACCTCCCATT
TCTCCCAGGG TTAATATTGC AGCAGCAAAA CAGGCGGACT TGATTTTAAG CTTCTTTTTG
GATGATGCGG ATAATACCGT AAATGTGAAT TGTCAGGAAG GATGA
 
Protein sequence
MNEFEIGLMS YLGREKLEKL GKVKVGIAGA GGLGSNCALH LVRSGFKNLK IVDFDVVEPS 
NLNRQFFFLD QLGRPKVLAL KENLARINPD VMIEAIQQKV DRNNAKQLFD DCDAVVEAFD
KVECKTMMAE AFASSGKFFV CASGLAGWGN SDEIRIRKVH DRFYIVGDFV TGVKEGIPPI
SPRVNIAAAK QADLILSFFL DDADNTVNVN CQEG