Gene Cthe_0563 details

Gene Information

• Locus tag: Cthe_0563
• ID: 4808238
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 690422
• End bp: 690934
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640105977
• Product: heptaprenyl diphosphate synthase component I
• Protein accession: YP_001036992
• Protein GI: 125973082
• COG category: [S] Function unknown
• COG ID: [COG4769] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.752463
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACAGAG TAAAAAAGAC TGTTTTGCTG GGGTTGTTTG TTTCTCAGGC TTTGATTTTG 
TCAATAGTTG AATCATGGAT ACCAATTCCC TCGCCGGTGC CGGGAGTAAA GCTTGGACTT 
GCCAATATAA TAACCGTAAT AACTATCATA TTTTTTGGAT TTAGGGAAGC AGTTTCGGTG 
GTAATTGCAA GGTGTGTTCT TTCATCTATA TTTGGCGGAG GGGGATGGAT GCTTTTCCTG 
TTCAGTGTAA CGGGAGGAGT GCTTAGCTCT GTCGTCATGT CGATTCTTTA TAAATCAGGA 
CGTGATAAAT TCAGTATAAC GGGAATAAGT ATAGCTGGAG CGGTTTCGCA CAATGTCGGC 
CAGATATTTG TAGCAGCTGT TTTTATGAAA GACCTGGCGG TTGCCGTGGT TTTGCCGGTG 
CTTTTGGTAT CAGGCTGTAT AATGGGCTTT TTTGTAGGTC TTGTAAGCAG TTTTTTGGAA 
GGTGTGTTGA GAAAAACAAG GATATTCGAT TAA 

 

Protein sequence

MNRVKKTVLL GLFVSQALIL SIVESWIPIP SPVPGVKLGL ANIITVITII FFGFREAVSV 
VIARCVLSSI FGGGGWMLFL FSVTGGVLSS VVMSILYKSG RDKFSITGIS IAGAVSHNVG 
QIFVAAVFMK DLAVAVVLPV LLVSGCIMGF FVGLVSSFLE GVLRKTRIFD