Gene Cthe_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0516 
Symbol 
ID4808318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp631673 
End bp632029 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content48% 
IMG OID640105931 
ProductIS66 Orf2 like 
Protein accessionYP_001036946 
Protein GI125973036 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000107243 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGGTG ACATCTCCAA GGCTGAAAAG ATCTATATAG CCTGCGGGTA TACAGACATG 
CGGAAAGCTA TTGACGGACT GGCAGCTATT GTTCAACAGA ACTTTCAGTT GAACCCATTC
CAGAACAGTC TGTTTCTCTT TTGTGGCCGG CGGCGGGATC GGATGAAAGC GCTCTATTGG
GAAGGCGACG GTTTTGTTCT CCTATACAAG CGCCTGGAAA ACGGAAAATT TCAATGGCCC
ATGAATGCTG ATGCGGTTCG GGCACTCACC CCCCAGGAAT TCCGTTGGCT GCTTGAAGGC
CTCTCAATTG ACCAGCCTAA AGCAGTAAAA AAGATAGAGA TAGGAGCCTG CATTTAA
 
Protein sequence
MLGDISKAEK IYIACGYTDM RKAIDGLAAI VQQNFQLNPF QNSLFLFCGR RRDRMKALYW 
EGDGFVLLYK RLENGKFQWP MNADAVRALT PQEFRWLLEG LSIDQPKAVK KIEIGACI