Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0516 |
Symbol | |
ID | 4808318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 631673 |
End bp | 632029 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640105931 |
Product | IS66 Orf2 like |
Protein accession | YP_001036946 |
Protein GI | 125973036 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000107243 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGGTG ACATCTCCAA GGCTGAAAAG ATCTATATAG CCTGCGGGTA TACAGACATG CGGAAAGCTA TTGACGGACT GGCAGCTATT GTTCAACAGA ACTTTCAGTT GAACCCATTC CAGAACAGTC TGTTTCTCTT TTGTGGCCGG CGGCGGGATC GGATGAAAGC GCTCTATTGG GAAGGCGACG GTTTTGTTCT CCTATACAAG CGCCTGGAAA ACGGAAAATT TCAATGGCCC ATGAATGCTG ATGCGGTTCG GGCACTCACC CCCCAGGAAT TCCGTTGGCT GCTTGAAGGC CTCTCAATTG ACCAGCCTAA AGCAGTAAAA AAGATAGAGA TAGGAGCCTG CATTTAA
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Protein sequence | MLGDISKAEK IYIACGYTDM RKAIDGLAAI VQQNFQLNPF QNSLFLFCGR RRDRMKALYW EGDGFVLLYK RLENGKFQWP MNADAVRALT PQEFRWLLEG LSIDQPKAVK KIEIGACI
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