Gene Cthe_0325 details

Gene Information

• Locus tag: Cthe_0325
• Symbol: nadE
• ID: 4808471
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 410598
• End bp: 412535
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640105736
• Product: NAD synthetase
• Protein accession: YP_001036756
• Protein GI: 125972846
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG0171] NAD synthase; [COG0388] Predicted amidohydrolase
• TIGRFAM ID: [TIGR00552] NAD+ synthetase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0404544
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACG GTTTTTTCAG AGTGGGAGCG GCTGTTCCCA GATTGAAAGT AGGGGGATGC 
CGTTACAATT CCGATCAAAT AATCGGACTT ATTGGAAAAG GAGAAAAAGC AGGCATACAA 
ATACTGGTTT TCCCTGAACT TTCCATAACG GGATATACAT GCGGGGATTT GTTTCACCAG 
GAAACTTTGC TTGACGATGC CAAAGTGCAG TTGGGAAGGA TTCTGGAGGA GACTAAAAAC 
TCCTCCTGTA TATCCCTGAT TGGCATGCCG CTGGGCATTG ACAATCAGCT TTTTAACTGC 
GCCGTTGCAA TACAAAAAGG AAGAATACTT GGTGTTGTTC CAAAGACATA TGTTCCCAAC 
TACAGTGAGT TTTACGAGCA AAGGTGGTTT TCTTCCGGCA GAAACGCTCT GAGGGATACA 
ATTATGCTTT GCGGGCAGGA AGTACCCTTC GGGGATGATT TGCTGTTCGA GGACGAAAAA 
GGGGAAATGT GCTTTGGAAT TGAGATTTGT GAAGATTTGT GGGTGCCTGT TCCTCCAAGC 
TCTTTTCAGG CGATGGCCGG AGCGTTGGTT ATTTTTAATC TTTCTGCCAG CAATGAAATT 
GTAGGCAAAT ATGAGTACAG AAAGGAACTG GCAAGGCAGC AGTCGGCAAG GTGTATAGCA 
GGTTATGTTT ACACATCTTC GGGCGTGGAT GAATCGACCA CGGATGTTGT TTTCGGAGGT 
CACGCAATGA TCTTCGAAAA CGGAAGTCTG CTTTGCGAAT CCGAAAGATT TTTGATTGAC 
GAGCAGCTAA TTTTTTCTGA AATTGATATC CAGAAGCTGA TGAATGACAG AAGAAAAAAC 
ACCAGCTTTA TGGAGCTTTG GAGAGATAAC GTAAGAGAGT TCCGGAAGGT GAAGTTTGAA 
ATTGAGGAAT TTGAAGCGGA AAACATAACA AGATATGTGC CACCTCATCC TTTTGTGCCT 
TCAGACGGGA GCAGCCGTGA CAGAAGATGC AGCGAGATTT TTGCAATTCA GACCTCCGCT 
TTGGCAAAGA GAATCAGGCA TACTGGGCTG AAACGGGCTG TTATAGGCAT ATCGGGAGGC 
CTTGATTCCA CACTGGCACT TTTGGTAACC GCTAAAGCTT TTGATTTGCT AAATATCCCT 
AGAAAAAATA TTTTGGCAAT TACCATGCCG GGCTTTGGAA CTTCCGATGT GACTTATACC 
AACGCCATGG AGTTTATGAA GTCAATGGAC GTGGAAATAC GGGAAATAAA TATTAAGGAT 
GCATGTCTTC AGCATTTTAA GGATATCGGT CACGATCCCA GCATACATGA CATTACTTAT 
GAAAATGTTC AGGCGAGGGA ACGTACGCAG ATATTAATGG ATATCGCAAA CAAGGAAGGC 
GGTCTTGTAA TCGGGACCGG TGACCTTTCG GAGCTGGCAT TGGGCTGGTG TACCTATAAC 
GGGGATCATA TGTCGATGTA TGCAGTAAAC GCCAGCATTC CCAAGACATT GGTGAGTTTT 
CTTGTAAGAT GGGTTGCGGA CAATATGTTG GAAAGCAAAG CAAAGGATGT ATTGTACAGA 
ATACTTGACA CTCCTATATC TCCGGAGCTT CTTCCTCCCG ATGCAAAGGG TGAAATTAAT 
CAAAAGACGG AAGATATTAT AGGACCTTAT GAACTTCATG ATTTCTTCCT GTATCATATG 
TTAAGGTACG GCGCAGCTCC GGGAAAAATA CTGATTCTTG CAAAGAAAGC CTTCGAAGGC 
AAATACACGG ACGATACAAT AAAGAAATGG TTAAAGGTAT TTGTGAAACG CTTTTTCAGC 
CAGCAGTTTA AAAGATCGTG TCTGCCTGAC GGGCCAAAGG TCGGTACAAT CAGCCTTTCA 
CCAAGGGGAG ACTGGCGTAT GCCCAGTGAT GCCGTTGCAG ATTCGTGGTT GTCTGAATTG 
GAAAGCATGC AGGAATAA 

 

Protein sequence

MKNGFFRVGA AVPRLKVGGC RYNSDQIIGL IGKGEKAGIQ ILVFPELSIT GYTCGDLFHQ 
ETLLDDAKVQ LGRILEETKN SSCISLIGMP LGIDNQLFNC AVAIQKGRIL GVVPKTYVPN 
YSEFYEQRWF SSGRNALRDT IMLCGQEVPF GDDLLFEDEK GEMCFGIEIC EDLWVPVPPS 
SFQAMAGALV IFNLSASNEI VGKYEYRKEL ARQQSARCIA GYVYTSSGVD ESTTDVVFGG 
HAMIFENGSL LCESERFLID EQLIFSEIDI QKLMNDRRKN TSFMELWRDN VREFRKVKFE 
IEEFEAENIT RYVPPHPFVP SDGSSRDRRC SEIFAIQTSA LAKRIRHTGL KRAVIGISGG 
LDSTLALLVT AKAFDLLNIP RKNILAITMP GFGTSDVTYT NAMEFMKSMD VEIREINIKD 
ACLQHFKDIG HDPSIHDITY ENVQARERTQ ILMDIANKEG GLVIGTGDLS ELALGWCTYN 
GDHMSMYAVN ASIPKTLVSF LVRWVADNML ESKAKDVLYR ILDTPISPEL LPPDAKGEIN 
QKTEDIIGPY ELHDFFLYHM LRYGAAPGKI LILAKKAFEG KYTDDTIKKW LKVFVKRFFS 
QQFKRSCLPD GPKVGTISLS PRGDWRMPSD AVADSWLSEL ESMQE