Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0257 |
Symbol | |
ID | 4808605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 316137 |
End bp | 317189 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640105669 |
Product | twitching motility protein |
Protein accession | YP_001036689 |
Protein GI | 125972779 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTGA AGGAAATTTT AAAAATGGGT GTTGATAATA AAGCTTCTGA TATACATTTG ACTGTGGGAA GGGCTCCTTC TTTCAGAATA AACGGGAAAA TGAAAACGTT TACTGACAAT ATACTGTCTC CGGAAGATAC AATGAGCTAT GCCAAAGAGT GTTTGGACAA GGAAAAGCTT GAGCATCTTA TGGCTGTGGG AGAAGTTGAT TTTTCAATGA CGGTTCCCGG AATTTCCAGG TTCAGGGTGA ATGTGTTTTT TCAAAGGGGC TCTGTGGCAA TAGTATTCAG AATACTTGCT TCCACAATAC CGACTCTGGA TTCTTTGAAT TTTCCTGAAG TGATTAAGGA CATTTGCAAA ATAAAAGAAG GGCTCATACT TGTAACCGGC CCCACGGGAA GCGGAAAATC CACTACCATG GCTTCAATTA TCAATGAAAT AAACTCTACC AGGGAAGGGC ATATATTGAC TCTTGAAGAC CCTATCGAAT ATATTTTCAA GCATGACAAA TGTGTCGTAA ACCAGAGGGA AATATCCCAG GACAGCAAGT CCTATGCCAG TGCTTTAAAA GCTGCCTTAA GAGAAGACCC CGATGTGATA TTCATAGGGG AGATGAGGGA CAATGAGTCT ATAAGTATTG CGGTTACGGC GGCAGAGACG GGGCACCTGG TTCTTTCAAC CCTGCATACT CTGGGTGCGG CTAAAACCAT AGACAGGCTT ATTGACGTTT TTCCACCCCA CCAGCAACAG CAGATAAGGG TCCAGGTATC CAGTGCGCTA AAGGCGGTTA TATCCCAGAG ATTGATTCCC GATATTGATA ACAAAGGAAG AGTTGCGGCT CTTGAAATAA TGATTGTTAC TCCGGCAATC AGCAATCTCA TAAGGGAAGG CAGAGTGGCA GGAATTACTT CAATGATTCA GACGGGTGCG GCCCAGGGGA TGAAACTTCT CGATAAATCC ATAGCCGAAC TCTATCAGCA AGGGCGCATA TCAAAAGAAA GTGCATACGA ATACTGTGCG GACAGAGAGC TTCTAAAAAG GTTTATAGGG TAG
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Protein sequence | MELKEILKMG VDNKASDIHL TVGRAPSFRI NGKMKTFTDN ILSPEDTMSY AKECLDKEKL EHLMAVGEVD FSMTVPGISR FRVNVFFQRG SVAIVFRILA STIPTLDSLN FPEVIKDICK IKEGLILVTG PTGSGKSTTM ASIINEINST REGHILTLED PIEYIFKHDK CVVNQREISQ DSKSYASALK AALREDPDVI FIGEMRDNES ISIAVTAAET GHLVLSTLHT LGAAKTIDRL IDVFPPHQQQ QIRVQVSSAL KAVISQRLIP DIDNKGRVAA LEIMIVTPAI SNLIREGRVA GITSMIQTGA AQGMKLLDKS IAELYQQGRI SKESAYEYCA DRELLKRFIG
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