| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0247 |
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| Symbol | |
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| ID | 4808595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 300315 |
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| End bp | 302120 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640105659 |
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| Product | DNA mismatch repair protein MutS-like protein |
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| Protein accession | YP_001036679 |
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| Protein GI | 125972769 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAA AGCAAATGTA TTTAAAGCGT ATGCGCCAAT ATAGTGATAA TGCGGAAAAG
CTTGAAAGAC GTTCGGGAAT GTACAGCACA ATAAGGCTTG TAACATTTGC AGCAGGTACA
TTCTTTACGG TTCTTGCTTT TATGTATTTA AGCAATGTCC ATGGGTTTAT TAGTATGGGA
GTATTTTTTG TACTGTTTCT CTTTTTGGTT GCGAAGCATC AAAAAGTAAT CGATGAAACT
TTAAAATATC GCACTCTTGC GGAAATAAAC AAAAGATGCG TAGCAAGAAT GGAAGGCACG
TGGACAGAGT TTGAGGACAA GGGAGAGGAA TATGCAGACC CAAATCATAT GTATTCCAAA
GACCTTGATG TTTTTGGGCA TGGTTCTCTT TTTCAGTGGA TCAATACGAC AAATACATTT
TTTGGCAGGG AAAGGCTAAG GCGTTTGCTG GAATTCCCTG AAAAGGAGGC CGGACAAATC
AGAAAGAGGC AGAATGCGGT AAAGGAGCTT TCAAAGAAAA TTGACTTTTG CCAAAGTTTG
CAATGTGAAG GAATGATGGC TCAAAATGCT TCGAAAAATC CTGACAAGCT ACTTGACTTT
TGTGAGGACG GCACCAAACT TTTTCGTAAC AAGCTTGCAG AACAGTTGTT TTATATTCTT
CCGGAGCTTA CAATAGTTTT TCTGGTTATA TGCTGGCTTG ATTCTTCGGT TTCGCTGTAC
ATACCTTTCT TTCTTCTTGG TGTGCAGGCT GTCATAAATA TTGTGTTGCA TGGCAGGGTA
AGCAGTATTT TAGGTCCGGT AAGCAGGTAC AAGAATGAGA TAAAGGTATT TTATAAAATG
ATTGAACTGA TTGAGAAGAA AGAGTTTGAG GATGAATACC TGATAGAATT AAAATCCCGG
CTGTTTGACA AGAAGAAACC GGCATCGGAG CAGATAAAGG ATTTGGAGAA AATTGTAGAG
GCCACTGACA TCGGGAAGGG TTATATAGTT GAGATTTTAT TGAATTTTTT CTTGTTCTGG
AATATTCACT GTGTGTTTGC ATTGGAAAGA TGGAAAGCAA AGGCCGGTAA GGCAATACGA
ATCTGGCTTG AGACTATAGG TGATTTTGAA GCTTTGGCAA GTTTGGCTCT TGTTGCGCAG
ATGAACCCCG AATGGGCTTT CCCTGAAATA TCGGACCGGA AGGTTTGCTT TAATGCCGTT
GACATGGGAC ATCCTTTGAT AAATGAGGGT AAACGTGTGT GCAACAGTAT CAATATGGAC
AATAAAATCT GTATTGTTAC AGGGTCGAAT ATGTCCGGGA AAACCACGCT TTTGAGGACT
GTGGGGGTAA ATCTTCTGCT TGCTTATGCG GGAACCGCCG TTTGTGCCAA AAAAATGACA
TGCTCCGTAA TGGATATATG CACTTCAATG AGGGTTGTAG ATGATTTGAA CGAGGGAATA
TCCACTTTTT ATGCGGAGCT TTTAAGAATA AAGATGATAA TAGACCACTC AAGAATGAAA
AAGCCGATGA TATTCCTTAT TGACGAAGTG TTCCGGGGAA CCAATTCCCT TGACAGGGTC
ACAGGTGCAC GAAATGTTTT GCTGAATCTT GACAAAGACT GGGTTATCGG AATGATTTCA
ACCCATGATT TTGAACTCTG CAATTTGGAA AAAGGACGCG AAGGAAGGAT TGTCAACTAC
CACTTTGCAG AAACCTACAC CAACAACGAA ATAAAATTTG ATTATATTTT AAGGCGGGGA
CAGTGTAAAA AAAGCAATGC AAGATATTTG ATGAAAATGG TGGGAATAGA GCTTTTGGAT
GAGTGA
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| Protein sequence | MNTKQMYLKR MRQYSDNAEK LERRSGMYST IRLVTFAAGT FFTVLAFMYL SNVHGFISMG
VFFVLFLFLV AKHQKVIDET LKYRTLAEIN KRCVARMEGT WTEFEDKGEE YADPNHMYSK
DLDVFGHGSL FQWINTTNTF FGRERLRRLL EFPEKEAGQI RKRQNAVKEL SKKIDFCQSL
QCEGMMAQNA SKNPDKLLDF CEDGTKLFRN KLAEQLFYIL PELTIVFLVI CWLDSSVSLY
IPFFLLGVQA VINIVLHGRV SSILGPVSRY KNEIKVFYKM IELIEKKEFE DEYLIELKSR
LFDKKKPASE QIKDLEKIVE ATDIGKGYIV EILLNFFLFW NIHCVFALER WKAKAGKAIR
IWLETIGDFE ALASLALVAQ MNPEWAFPEI SDRKVCFNAV DMGHPLINEG KRVCNSINMD
NKICIVTGSN MSGKTTLLRT VGVNLLLAYA GTAVCAKKMT CSVMDICTSM RVVDDLNEGI
STFYAELLRI KMIIDHSRMK KPMIFLIDEV FRGTNSLDRV TGARNVLLNL DKDWVIGMIS
THDFELCNLE KGREGRIVNY HFAETYTNNE IKFDYILRRG QCKKSNARYL MKMVGIELLD
E
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