Gene Cthe_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0153 
Symbol 
ID4808641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp192805 
End bp193230 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content43% 
IMG OID640105564 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001036587 
Protein GI125972677 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0185653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTAC TGGGGATTGA TTACGGAGAC AGCAGAATCG GGATTGCTAT TAGCGACCCG 
TTGGGATGGA CGGCTCAAGC ACTTGAAACC ATAACCTGGA GGTCGGATGT CGAAGTTCCG 
CTAAAAAGGA TATCTGAATT GGTCGAAGAA TATGGAGTAA AAACGGTCAT TGTCGGCTTT 
CCCAAAAACA TGGACGGCAC AGTGGGGGCC AGGGGAGAAA AGACAATAGA GTTTATTGAC 
CTGCTTCAGC AAAGAATAAA AGATATTGAA GTGATAAAAT GGGATGAGAG GCTGACTACG 
GTTGCCGCCA ACAGAACCAT GTATGAAATG GGAATAAAAA AATCAAAGAA AAAGCTGGTA 
GTGGATCAAA TTGCTGCAGT ATATATTTTA CAAGGATATC TCGACAGCAA GGGAAAGGTT 
TTGTAA
 
Protein sequence
MRVLGIDYGD SRIGIAISDP LGWTAQALET ITWRSDVEVP LKRISELVEE YGVKTVIVGF 
PKNMDGTVGA RGEKTIEFID LLQQRIKDIE VIKWDERLTT VAANRTMYEM GIKKSKKKLV 
VDQIAAVYIL QGYLDSKGKV L