Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0108 |
Symbol | |
ID | 4808732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 139692 |
End bp | 140333 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640105517 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001036542 |
Protein GI | 125972632 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATAA AAGTTGGAGA TCTCGTATCC ATACGTCATT TTTCCGGTAC AAAGCTTTTC AAAAGCCTGG TACTCGAATC AAACAATGAT GAGGTTCTGC TGAAACTTAC GGAAGACATC GCTCTTCTCA ATTGTTCAAT TGGTGACCCC ATAGTTTTAG GCTGTGAATT AGAAGAAAAT GTTTATATCT CCAGCTGTAC AACTTTGAAC GTAGACAAAC AGCAAAACAC TCTAAAGCTT AAAATCGACA ACTACGAGAC AACTTCAAAT AAAAGACTTT TCGTGAGATT TCCCGTGTCA CTGTATGCCG AAGCTCGAAT CGGCGAGTCC AACAAAAAAT ATCTGGCAAT TGTCAAAAAT ATCAGTTTTA ACGGAATGAT GATTCATACC AAAGAAGATT TTCCATTGTT TCAGGAGCTC AAGTTTGACA TTCATGCCGA TATTCCCATA CATCTTAAAG CAACCATCAT AAGAAAAGTA AAAGATGAGT ATAATTACGA ATATGGTTTG AAAATCAATT ATACCGATGT ACATACTCCG AATCTTTTAA AGAAATATCT GATTCTTCTG AAAAAGGAAC AGGAAGAATT TATTAAAAAG TTTAAAGAAG AGCAAAATGA CACACCGCAA GATACAAAAT AA
|
Protein sequence | MEIKVGDLVS IRHFSGTKLF KSLVLESNND EVLLKLTEDI ALLNCSIGDP IVLGCELEEN VYISSCTTLN VDKQQNTLKL KIDNYETTSN KRLFVRFPVS LYAEARIGES NKKYLAIVKN ISFNGMMIHT KEDFPLFQEL KFDIHADIPI HLKATIIRKV KDEYNYEYGL KINYTDVHTP NLLKKYLILL KKEQEEFIKK FKEEQNDTPQ DTK
|
| |