Gene Cthe_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0107 
SymbolribH 
ID4808731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp139133 
End bp139600 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content44% 
IMG OID640105516 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001036541 
Protein GI125972631 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTA AGACAAATGA AGGTAAGCTT ATAGCTTCAG GTTTGAAGTT TGGGGTGGTT 
GTGGCACGTT TTAACGAGTT TATCAGCAGC AAGCTCTTAG GAGGAGTGAT TGACGGACTG 
ATAAGGCATG GAGCGTCCGA AGAGGACATT GAAATTTCAT GGGTGCCCGG GGCTTTTGAG 
ATACCTTTGG TGGCTCAGAA AATGGCCAAT TCCAAAAAAT TTGACGCCAT AATTTGCATC 
GGTGCCGTTA TAAGAGGTTC AACCCCTCAT TTTGACTATG TGGCCAACGA AATGTCAAAG 
GGAATTGCAA AAGTATCGCT GGATACGGGA ATACCAATTG CTTTTGGTGT CCTTACCACG 
GATACCATTG AACAGGCCAT TGAAAGAGCG GGAACCAAGG TTGGAAACAA AGGCTATGAT 
GCAGCGGTTA CGGCAATTGA AATGGCAAAT TTGCTAAAGA TGATATAA
 
Protein sequence
MAIKTNEGKL IASGLKFGVV VARFNEFISS KLLGGVIDGL IRHGASEEDI EISWVPGAFE 
IPLVAQKMAN SKKFDAIICI GAVIRGSTPH FDYVANEMSK GIAKVSLDTG IPIAFGVLTT 
DTIEQAIERA GTKVGNKGYD AAVTAIEMAN LLKMI