Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0007 |
Symbol | |
ID | 4808820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 11461 |
End bp | 11994 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640105417 |
Product | hypothetical protein |
Protein accession | YP_001036442 |
Protein GI | 125972532 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.223344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTTTG ACTTTGCGCA GTTCTCTACT ATAAAAAAGA AAACATTAGG GGGAATGAAA ATAGTGAGTT TCTTAAAAAA GCATGTACCG GCTTTAGTGC TTATTTTAAT ACTCTTAATA GGTGCAACGG CTTTATTTTT TTATATAAAT GAGAAAGAAA AACAGGACTA TATTGAAATA TTCCACAGAA ATAAAAGCAT TTTTGAAGAA ATATCAACTG AACTTATGCC GTTGGAATAT GGAACTACTG TTTCGAAAGA GGCAGGCAAA ATTGTTGTAA AACAAAACGG GAATATCACA GAAATTTTTC AATATCCAAT TGATGAAGAA ACAAAAACAA ATATAAGAAG AGCGATAAAT GATTTCGGTG TAAAAAGTAT TAATAAAACA GATGAATGCT TGAAGTTTAT CTACAGCAGC AAAAGGGATT TTCATGCTTT GGTTTATACT GCGGATAAAA GTAAATTGAC CGGCTTTACC GATGTGGAAC ACTTAGAGGG CAACTGGTAC TATTGTTATA TACTTTATGA ATAA
|
Protein sequence | MDFDFAQFST IKKKTLGGMK IVSFLKKHVP ALVLILILLI GATALFFYIN EKEKQDYIEI FHRNKSIFEE ISTELMPLEY GTTVSKEAGK IVVKQNGNIT EIFQYPIDEE TKTNIRRAIN DFGVKSINKT DECLKFIYSS KRDFHALVYT ADKSKLTGFT DVEHLEGNWY YCYILYE
|
| |