Gene Csal_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3216 
Symbol 
ID4028550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3584488 
End bp3585534 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content59% 
IMG OID637968431 
ProductLacI family transcription regulator 
Protein accessionYP_575259 
Protein GI92115331 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACG AGAAGCCATC ACCGCGGGGT AGACGCCGCC ATCATGGCGA CAACCGAGTC 
ACCATCGACG ATGTGGCAAA AGAAGCTGGG GTGGCCCCGA TTACGGTGTC TCGAGCTTTG
AACACGCCTG ATAAGGTGTC GGCCAAACTA CGCGAACGTG TCGATCAAGC AGTGACGTCA
CTGGGCTATG TCCCCAACCT CATCGCCGGA GGTCTCGCAT CAGCGGGTAC GCGAGTCATA
CCGGTCGTGG TGCCATCGCT ATCCATCCTG ACCTTTATCG AAGTAGTACA CGGCATCCAG
CAGACGCTCG AAGACGCTGG CTATCAAGTG TTATTGGGTT CGACCGATTT CGACTTGGAT
CGTGAAACTT CACTGATCGA TTCGGTGCTG GGCTACTCGC CGTCGGGGGT CATTTTGACA
GGTCTAAGGC ATAACGATAG CACCGTGCAA CGCCTCAAGG CCTGGGGCCG GCCAGTGGTC
GAGATCATGG AACTGGGACT GCCTTGCATC GATATGAATG TCGGTGTCGA CAACCCTCGA
GCGGGGGCCT GTATGGCCCA GCATCTCCTT GACCGTGGCT ATCGCCGCAT CGCCTTTCTC
GGGGTCGGGA TGGCGCGTGA CTATCGTGCC CGGCAACGTT TCGAAGGACA TCGCGAGGTG
CTGGCTGCCG CAGGGGTCGA GAGTGACCTT CTGTTTACGA GTGAGGAACC ATCCTCTTAT
GCAGCAGGAC GCCGTGTTTT CCTTGAAGCG CTGGCTGCCC GCCCCGACCT CGATGCGCTT
CACTTTGCCA ACGACAACCT CGCAGCCGGC GCGATCCTCG AGGCAAATCG TCAGGGAATC
CGCGTGCCTG AAGACATCGC CATTGGCAGC TATCTGGGCC TGTCTCTCGG CGAACACCTA
TCGCCTACGC TGACCACCGT GTCGGTGCCA CGATTCGAAA TGGGAGTCGA GGCGGCGAAG
CTACTGCTAG AGCGGCTAGA AGGTCGGTCG CCTTCTCAAC CTCGGATCGA TATCGGCTAT
CGCTTGATCA CACGCGAAAG CACTTGA
 
Protein sequence
MANEKPSPRG RRRHHGDNRV TIDDVAKEAG VAPITVSRAL NTPDKVSAKL RERVDQAVTS 
LGYVPNLIAG GLASAGTRVI PVVVPSLSIL TFIEVVHGIQ QTLEDAGYQV LLGSTDFDLD
RETSLIDSVL GYSPSGVILT GLRHNDSTVQ RLKAWGRPVV EIMELGLPCI DMNVGVDNPR
AGACMAQHLL DRGYRRIAFL GVGMARDYRA RQRFEGHREV LAAAGVESDL LFTSEEPSSY
AAGRRVFLEA LAARPDLDAL HFANDNLAAG AILEANRQGI RVPEDIAIGS YLGLSLGEHL
SPTLTTVSVP RFEMGVEAAK LLLERLEGRS PSQPRIDIGY RLITREST