Gene Csal_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3213 
Symbol 
ID4028547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3581392 
End bp3581907 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content52% 
IMG OID637968428 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_575256 
Protein GI92115328 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG CGGAACGTAT CACCTATATG GTCGATCTGT TTTGGAAGCT TTTGACCGCC 
ATCGTCATGA CGGCTTTCGC TCTGATGCTG ATCATCATGG CGATCCAGGT CATCTCGCGC
TATGCCCTGG GCATGGCAGT TCCCTGGACC GATGAAGCCT CGCGCTACCT GTTCCTCGCT
GAAATTTTCT TGGGCTCCGT ATTAGCGCTG CGCTTGCAGG AACACATTCG GATTACTGTC
GTGACCGATA TGCTACCGCG TCCCCTGCGT CATCTGGCAG GTATCTTGGC AGATATTGCG
TGCATGTTGG TGCTGCTGAT GTTGATAGGT GGTGCCTGGA ACATGATGGA GCGCACGGCG
GGTGTCATGG CTAGCACATT CGATATGAGT TTTTCCTATA TCTATTTGGT CCAGATGATC
TCCGCTCTCC TGATGATGGG CATCTTACTT GTCAATTTGT ACCGACGAAT CGTGTCTATC
TGTCTGCCCG TTAGCGATCT ACGCCGGAGT CTATGA
 
Protein sequence
MKKAERITYM VDLFWKLLTA IVMTAFALML IIMAIQVISR YALGMAVPWT DEASRYLFLA 
EIFLGSVLAL RLQEHIRITV VTDMLPRPLR HLAGILADIA CMLVLLMLIG GAWNMMERTA
GVMASTFDMS FSYIYLVQMI SALLMMGILL VNLYRRIVSI CLPVSDLRRS L