Gene Csal_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3208 
Symbol 
ID4028734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3575182 
End bp3576195 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content70% 
IMG OID637968423 
Producthigh-affinity nickel-transporter 
Protein accessionYP_575251 
Protein GI92115323 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGATCG CCCTGCTGCC GCTGCTGGCC CTTGCCATAC TCGCCACGAC CGACTGGGGA 
CAGGCCATGG CGCAACTCGT CATGGCCCAG ACGCATGACT GGCAGCGCTC GCTGCAGCGC
GGCCTGACCC TGTCGACGAT GGCCCTGTCG CGGCAGCCGT CGCTCGATAC CAGTCTCAGC
CTGATGGCGT TGAGCCTGGG GTACGGCGTC TTTCATGCCG TGGGCCCGGG GCACGGCAAG
GCGGTGATCA CCGCCTACCT GCTTTCGCAC CCCACCGCCC TGCGACGCGG GCTGTCACTG
ACCGTGGCGG CAGCGCTGCT CCAGGGGCTG GTGGCCATTG CGCTGGTCGG CGTGCTGGTA
TGGGGGCTGG GCCTGCTGAC CCGCGATGCC ATGGCACAGA CCGGCCTGCT CGAGCGGCTC
AGCTTCATCG TCCTGATTGG GCTCGGCGCC TGGCTGACGC TGCGTGCCTT GGCCCGGCTC
AGGCGGGCAC TGGACCAGTC GCGGCGAGCC CCCCTGGCCG CCGACGCCAG TGGCCATCCT
GCATCGTTCG AGGGCATGGC CTTCGAGGTT GCGCCGAGCG CTTCGAAGCG GCCCATCGAG
CCGCACACTG GCGCGGCATG CGATCGCTGC GGCGGTCATC ATCACATCGA CCCCAACGCC
ACGGGCACGA TCCGCGAGAG CCTGGGTACT TTGCTGGCGA TCGGCCTGCG GCCCTGCAGC
GGCGCCGTCA TGGTACTGGG CGTTGCCAGT CTGCTGGGCT ACTGGTGGGC CGGCGTCCTG
GCGGTGGTGG CCATGTCGGT GGGGACGGCG GTGACCACTT CCTGTCTGGC AATCTTCGCC
GTTTTCGCTC AGCAGCGCGC GTCGCGCCTG CTGGCGCGCT CGACGCCTCA CTGGCAGCGC
CTGGCCGGGC ACGGGATTGC CCTGTGCGGG GGCGTGCTGA TCCTGGCGCT GGGGATCGGG
CTGCTGATCA GTGTTCCAGG CACCTCGGGG GTGGCTCTGC CGGGGATTCG CTGA
 
Protein sequence
MLIALLPLLA LAILATTDWG QAMAQLVMAQ THDWQRSLQR GLTLSTMALS RQPSLDTSLS 
LMALSLGYGV FHAVGPGHGK AVITAYLLSH PTALRRGLSL TVAAALLQGL VAIALVGVLV
WGLGLLTRDA MAQTGLLERL SFIVLIGLGA WLTLRALARL RRALDQSRRA PLAADASGHP
ASFEGMAFEV APSASKRPIE PHTGAACDRC GGHHHIDPNA TGTIRESLGT LLAIGLRPCS
GAVMVLGVAS LLGYWWAGVL AVVAMSVGTA VTTSCLAIFA VFAQQRASRL LARSTPHWQR
LAGHGIALCG GVLILALGIG LLISVPGTSG VALPGIR