Gene Csal_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3170 
Symbol 
ID4028637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3535128 
End bp3536111 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content69% 
IMG OID637968384 
Producttranscriptional regulator 
Protein accessionYP_575213 
Protein GI92115285 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTAC ACTATGCCGG CCCGTTGCCC GAACCCATCG GGTTCCTGCT GCTGCCGCGC 
TTCTCGATGA TGGCGTTCTT CTCCGCCGTC GAGCCGCTGC GCATCGCCAA CCGCATCGCC
GGCGAGACGC TGTTCACCTG GCGTGTCATC AGTCTGGACA GCGCCCCGGT CACCGCCAGC
AACGACATGA CCCTGCTCGC CGACGATTCG CTTGAGTCGG CTCCCGCCCT GCCCAGCATC
GCCATCTGCG CCAGTTTCGA GCCCGAGGAA CGCCTGACCC GTCGCCTGCT GCGCTGGCTG
CACCAACGCG ACCAGGACGG CTGCGTGCTG GGCGGCATCG ATACCGGTAG CCTGATCCTG
GCCCGCGCCG ACCTGCTCAC GGGGCACCGT GTCACCCTGC ACTGGGAAAG CCTGCCGGCG
TTTCGCGAGC GCTTCCCCGA ACTCGACGCC GTCGAGTCGC TCTTCGAGGT CGGGCCGCGG
CGCTTCTCCT GTGCCGGCGG CGCCGCCGCG ATGGACATGA TGCTGGACCT GATTGCGCGC
CGGCACGGCG AGGCCCTGGC GGCAGCCGTC TCCGAGCAGT TGATCCACGC CCGCATGCGC
CCGCGTCACG ACCAGCAGCG TCAGGACCTC ACCCAGCGCC TGGGGACCCA CAAGCACAGC
GTGATCGAGG CCGTCGCCCT GATGGAGCGT CACCTCGAGG CGCCGTTGCC GCTCGCGCGA
CTCGCCGCGC GTATCGGCAT TTCCCTGCGC CAGCTTCAGC GTCTCTTCGA GCAAGAGCTG
GGCGAACGGC CACGCGACCA CTATCTCCGC CTGCGTCTGC AACGCGCCCG GCAACTGCTG
CGGGAAACCG ACCGCGACAT TCTCAGCATC GGCCTGGCCT GCGGCTTCAC TTCCGCCTCC
AGCTTTTCGC GGGCCTACAA GCAGCATTTC GGCGCCAGCC CGCGACACGC CCGCCGCGGC
CCCGACACTC CCCCCACGGC ATGA
 
Protein sequence
MRLHYAGPLP EPIGFLLLPR FSMMAFFSAV EPLRIANRIA GETLFTWRVI SLDSAPVTAS 
NDMTLLADDS LESAPALPSI AICASFEPEE RLTRRLLRWL HQRDQDGCVL GGIDTGSLIL
ARADLLTGHR VTLHWESLPA FRERFPELDA VESLFEVGPR RFSCAGGAAA MDMMLDLIAR
RHGEALAAAV SEQLIHARMR PRHDQQRQDL TQRLGTHKHS VIEAVALMER HLEAPLPLAR
LAARIGISLR QLQRLFEQEL GERPRDHYLR LRLQRARQLL RETDRDILSI GLACGFTSAS
SFSRAYKQHF GASPRHARRG PDTPPTA