| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_3139 |
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| Symbol | |
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| ID | 4028606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 3495262 |
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| End bp | 3496545 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637968353 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_575182 |
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| Protein GI | 92115254 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.562374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAACTT GGCTAGCCGT GATCATGCTC GTGTTGCTGC TGCTCGGGTT CCCCATGATG
GTTCCCCTGG CGGCGGGCAC GCTGTTCATG ATGTTCACCG GCATGACGTT TTTCGGGCCC
GATCAGGCCG TGAGCTGGAT GATCAACGGT ATCGGCAGTT GGGTACTCGC CGCCGTGCCC
ATGTTCATCT TCGCCGCCGA CATCCTGACC AAGGGCCACA CCGCCAACCG TCTGCTGGAT
GTCGTCGACG CCTTCACTCG CCACATCCGC GGTGGCTTGC CCATCACCAC CGCCGCCTCC
TGCGCGCTGT TCGGGGCCGT GTCCGGCTCC ACCCAGGCGA CGGTGGTGGC GATGGGCGGT
CCCATGCGCC CGAGGCTGCT GGCCAAGGGC TATAAAGACG ATTTCACCCT GGGGCTGATC
GTCAATGCCA GCGACATCGC GCTGCTGATC CCGCCGAGCA TCGGCTTCAT CGTCTACGGC
GTGGTGATGA AGACCTCGAT CGGCGACCTG TTCCTCGCGG GGATCCTGCC CGGCCTGATG
ATCCTGGCCA TGTTCGCCCT GTACTGTTAC ATCTATTCGC GCATCAAGGG CATCGAGGCG
GAGCCCCGGG CCTCCTGGCG CGAGCGCGCC CGCGCCATCC GCCGGGTGAT CCTGCCGATG
GGTTTTCCGG TCCTGGTCGT GGGGGGCATA TACGGCGGCT TTTTCAGCGC CGTCGAAGCC
TCGGCGGTCG CGGTGGCCTA CGCGCTGCTG CTGGAGGTGG TGATCTATCG TCAGGTCTCG
ATCCGCGACC TCGGCAGCCT CGCGCTGTCC ACGGGGATGA TCACCGCCGT GGTCTTCATC
CTGGTCGCCA TCGGTGCCGC CTTCTCCCAG ACCCTGGGCA CCGCCGGCGT GCCGGACAAG
ATCCTCGGCC CGGTCATCGA CGGCATCGGC GACAACCAGT TCCTGGCACT GCTGCTGATC
GCCGCGGCCT TCTTCGTCGG CTGCATGTTC GTCGACCCGA TCGTGGTCAT CCTGATCCTG
GTCCCGATCT TCAAGCCACT GGTGGACGCC ACTGGCCTGG ATCCGGTTCA CGTCGGCGTC
ATCGTCACGC TGCAAGCGGC CATCGGCTCG GCCACGCCAC CCTTCGGCTG CGATATCTTC
ACCGCCATCG CCGTCTTCCG CCGCCCTTAC ATGGACGTGA TTCGTGGTAC GCCACCGTTC
ATCGTGATCC TGGCATTGGC GACGATCATC CTGATCATGT TCCCGCAGAT ATCGCTGCTG
CTGCCGTCAC TCGGCGGCGA CTGA
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| Protein sequence | MLTWLAVIML VLLLLGFPMM VPLAAGTLFM MFTGMTFFGP DQAVSWMING IGSWVLAAVP
MFIFAADILT KGHTANRLLD VVDAFTRHIR GGLPITTAAS CALFGAVSGS TQATVVAMGG
PMRPRLLAKG YKDDFTLGLI VNASDIALLI PPSIGFIVYG VVMKTSIGDL FLAGILPGLM
ILAMFALYCY IYSRIKGIEA EPRASWRERA RAIRRVILPM GFPVLVVGGI YGGFFSAVEA
SAVAVAYALL LEVVIYRQVS IRDLGSLALS TGMITAVVFI LVAIGAAFSQ TLGTAGVPDK
ILGPVIDGIG DNQFLALLLI AAAFFVGCMF VDPIVVILIL VPIFKPLVDA TGLDPVHVGV
IVTLQAAIGS ATPPFGCDIF TAIAVFRRPY MDVIRGTPPF IVILALATII LIMFPQISLL
LPSLGGD
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