Gene Csal_3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3098 
Symbol 
ID4028739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3452422 
End bp3452853 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content60% 
IMG OID637968312 
ProductSmpA/OmlA 
Protein accessionYP_575141 
Protein GI92115213 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACC TGATTAAAAC AGTCACCTTT TCCGTCGTCC TGGCGCTCGT CAGCGGGTGC 
AGCTACGTCG GCGTTTACAA ACGCGACCTG GCACAGGGCA ATCTCATCAA CCAGGACATG
GTCTCGCAAC TGGAGACCGG CATGACCAAG GAGCAGGTAC GCTATGTCAT GGGCAGCCCC
CTGCTCAAAG GTCCGTTCAA CGAGGACCGC TGGGACTACG TCTTCTACCT CGACGAGGCC
TATGACGATG TGGAGGAAAA GCGTGTCACG CTGACCTTCC AGAACGGCCG GCTGGCCGAT
ATCGATCGTC ATGGCAACAT CGAAGACGAT GTCGACCTGA CACCGCAAAG CGGTCCCGGC
CCCGCCGTCG AAGGCAGCGG CCCCGGCGAG GGCGCCGCTG CAATGGGCCC CAGCTACGGT
CCGGAAGAAT AA
 
Protein sequence
MQNLIKTVTF SVVLALVSGC SYVGVYKRDL AQGNLINQDM VSQLETGMTK EQVRYVMGSP 
LLKGPFNEDR WDYVFYLDEA YDDVEEKRVT LTFQNGRLAD IDRHGNIEDD VDLTPQSGPG
PAVEGSGPGE GAAAMGPSYG PEE