Gene Csal_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3030 
Symbol 
ID4028997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3375291 
End bp3375926 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID637968237 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_575073 
Protein GI92115145 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAACC TCCTCCTCGC AGAAGACCAC TTGCTGGTCC GCGCTGCTCT CGCGCACCTC 
ATCAACGCTT TTCAAGGCAT TCACGTTGTC GCCGAAGAGG CGTGCGGACA CGAAATCCTG
GATGCCGCTC GTATCCATCC CGTGGACGTG GCCCTGATCG ATGCCGCGCT GCTTCCCATT
CAGGACTGGG ATCTGATTCG CCAGCTCAAG ACGGTGCGGC CCGGCATCAA CATTCTGGTC
ACCTCCAGTT ATCTCAGCGA TCGCTATGTC GAGCGCCTGA TGGAAGCCGG TGCCTGTGGT
TTCGTGCACA AGAATGCTGC CGTCAATGAG CTTGAGACCG CCATTCGTCA AGCGGCGGCG
AATCGGCGCG TACTCTACCC GGGGGTCGAC GTCTCGGGCC TCGCCGCTAC TGAGCAGGCA
CCGTCTTCCG TGCCTGCTTT GACCCGACGC CAGCAGGAGA TTCTCAAGCT TATCGTGGAT
GGCTGCCGCA GCCGGACGAT CGCGGAGCAG CTCGACTTGA GCGTCAAGAC CGTGGAGGCC
CATCGCCGGG AAATCATGCG GCGCGTGGGC AAGCAGAACA GTGCCGGGTT GGTGAAGGAA
GCCATCCGCC TGGGGCTGGT GCCTTTCCCG ACATAG
 
Protein sequence
MINLLLAEDH LLVRAALAHL INAFQGIHVV AEEACGHEIL DAARIHPVDV ALIDAALLPI 
QDWDLIRQLK TVRPGINILV TSSYLSDRYV ERLMEAGACG FVHKNAAVNE LETAIRQAAA
NRRVLYPGVD VSGLAATEQA PSSVPALTRR QQEILKLIVD GCRSRTIAEQ LDLSVKTVEA
HRREIMRRVG KQNSAGLVKE AIRLGLVPFP T