Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3003 |
Symbol | |
ID | 4028969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3342319 |
End bp | 3343317 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637968209 |
Product | ectoine hydroxylase |
Protein accession | YP_575046 |
Protein GI | 92115118 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | [TIGR02408] ectoine hydroxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGTGT TTGTCGGCGC CGACCTCTCC GACTACGTTT TCTCGGGGAT CGGCGGCAAT ACCGTTCCCA GCAGACTAAT GGAGGAGTTT GCAATGAAAG AGACACAAGA CCTGTTTCCG ACGCGCCTGG AACGCAAACT GGGAATGTTC GAGCGCATCG ATCCGGTCGT ACACAGTGAA GGCGATCAGC GCAAGGGGCC GCTCAGCGAA GCCGAGCTCG ACGAGTTCGA CCGCAAGGGG TTCCTGTCTT TCGAGGGGTT CTTCGACGAG GACGAAATGG AAGCGTTCCT CCAGGAGCTC CGCGACTACG AGAGCGATGA AGACCTCAAG CTCTCGGAAG GCACCATTCT CGAGCCCGGC AAGCAGGAAA TCCGTTCGAT CTTCGGCATC CACGAGGTGT CAGAACGTTT CAGTCGTCTG ACGCGCGATC CACGCCTATT GGCCATGGTG CAACAGATCC TCGGTGGCGA TGCCTACATT CACCAATCGC GGATCAACTA CAAGCCGGGC TTCAAGGGCA AGGGCTTCGA CTGGCATTCG GATTTCGAGA CCTGGCACAG CGAGGACGGC ATGCCGCGCA TGCGCTCGGT GAGCTGCTCG ATCATTCTCA CCGAAAACGG CGAGTTCAAC GGTCCGCTGA TGCTGGTGCC CGGTTCGCAC CATTATTTCG TGCCCTGCGT GGGGCGTACG CCGGAGGACA ACTACAAGGA GTCGCTGAAG AGTCAAGACA TCGGCGTGCC GGACGATGCC AGCCTGCGCG ACCTGATGCT CAAGGGCGAT ATCGAAGCCC CCAAGGGTCC CGTCGGGTCG CTGGTGATGT TCGAGTGCAA CACCCTGCAC GGCTCCAACA TCAACATGTC GTGCTGGCCG CGCAGCAACC TGTTCTTCGT CTACAACAGT GTCGAGAACA CGCTGCACGA CCCGTATTGC GGCAACCGTC CGCGGCCCGA GTTCCTCGCC AACCGCAAGG ACTGGCGGCC GCTGACACCG GCCGAGTAA
|
Protein sequence | MAVFVGADLS DYVFSGIGGN TVPSRLMEEF AMKETQDLFP TRLERKLGMF ERIDPVVHSE GDQRKGPLSE AELDEFDRKG FLSFEGFFDE DEMEAFLQEL RDYESDEDLK LSEGTILEPG KQEIRSIFGI HEVSERFSRL TRDPRLLAMV QQILGGDAYI HQSRINYKPG FKGKGFDWHS DFETWHSEDG MPRMRSVSCS IILTENGEFN GPLMLVPGSH HYFVPCVGRT PEDNYKESLK SQDIGVPDDA SLRDLMLKGD IEAPKGPVGS LVMFECNTLH GSNINMSCWP RSNLFFVYNS VENTLHDPYC GNRPRPEFLA NRKDWRPLTP AE
|
| |