| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2934 |
|---|
| Symbol | |
|---|
| ID | 4028329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 3271907 |
|---|
| End bp | 3273847 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637968141 |
|---|
| Product | beta-ketoacyl synthase |
|---|
| Protein accession | YP_574978 |
|---|
| Protein GI | 92115050 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATC GTCATCCACA GCATTACGAG GAACGCGGCT TGTCACAGTT ACCGGTGATC
GTCGGCATGG GCGGTGTTAA CGCCGCCGGC AGAACCTCGG GCCACCAGGC TTTTCGCCGA
ACGATTCTCG ACGCCTTGCC CGACACCCTT CAGGCACAGA CCATTCTCGC CCTGGCCGCC
ATGATGCAGC TTGTGACGCG GCTGGAAGAC GGCGCCTGGC AGGATGCCCA CGGAGAGATT
CTCGACGCCG CCGACGTCGT TTCGCGCTAT CGGCAACACG TACTCGACCA TACCCTGATC
CGCCGCATCG AAGACGAGCG TTTCGGCAGC GAAGGCATTC CCGCCAATCG TGCCGCGCAG
CTCGACCTCG ACGATGCGCT GACCTTTCGC GTGCGCCGGC GGCAATTGCC CAACGACCTG
CCGCCGACCT GGCAGGTGCG CGACATCGAC AAGCGCATGG TCGAAGTCGT GGTGCCGCCG
GGGTCGCTGA ACGTCCTGCT GCCCGAACGG CGCAGCGCGC AGGTGCGCTC GGCGGGCCAG
TTGCCCAGCG GATTCGCGCC GGAGACCCTG TACCGGAGCG TGCATCACCC GCGCGGGCTG
TCGATGACCA TCTTCGGCGC CTCCGACTGC CTCGGCCAGA GCGGCCTGGA CTGGTCGGCG
CTGCGCAATC GGCTCGACCC GGACGCCATC GCCGTGTATG CCGGCAACTC CATCGGCCAG
CTCGACAACG AGGGCTGGGG CGGCCTGCTG CAGAGCTTCG TCGGCGGCGG ACGCGCCACG
TCCAAGCAGA TGCCGCTGGG TTACGGCCAG ATGCCCGCCG ACTTTCTCAA CGCCTACGTG
CTGGGAAGCG TCGGCGCCAC CGGTGCCGTG CTCGGCGCCT GCGCCAGTTT CCTCTATAAC
CTGCGCCTGG GGCTGGAGGA CATTCGCAGC GGGCGGCGGC GCGTGGTCAT GGTGGGCACC
AGCGATGCCC CCATCACGCC GGAAATCGTC GAGGGCTTTC GTACCATGGG CGCGCTGGCC
GACGACGAGA GCCTCAAGGC GCTCGATGCG CTGACGCTGC TGACCGATAG CGACTATCAG
CGGGCCTGCC GGCCCTTCGC GCGCAACTGT GGCTTCACCA TCGCCGAGTC GACCCAGTTC
CTGCTGCTGA TGGACGATGC CCTGGCGCTC GAGACCGGCG CCCAGATTCT CGGCGCGGTG
CCCGATGTGT TCGTCAACGC CGATGGCTGG AAACGCTCGA TCTCCGCGCC GGGCATCGGC
AACTACATCA CCCTGGCCAA GTCGGTGAGC CTGGCCCGGG ACATGCTCGG CGAGGATTCG
GTGCGCCACC GCAGCTACCT GCATGCTCAC GGCACCAGCA CGCCCAAGAA TCGCACCACC
GAGTCGCACG TGTTCGACAT GGTGGCCCGC ACGCATGGCA TCGAGGCCTG GCCGGTGGCC
GCCATCAAGG CCTTCGTCGG CCATTCGCAA GGCGGCGCGG CGGGCGACCA GCTCGCCAGT
GCCCTGGGCA CCTTCGCCCA TGGCGTGATT CCCGGCATCG CCACCCTCGA CGCCGTGGCC
GACGACGTTC ACGCCGAACG TCTGCGTTTC TTTCGCGATC CGCTCCCTTT CGAGGCCGAC
GCGACCTTCA TCAACGCCAA GGGCTTCGGC GGCAACAACG CTACCGGGCT GGTCATCTCG
CCCGCCGCGA CCGAGCGCCT GCTCGCCAAG CGTCACGGTC AGCGCGCCGT CGATGACTGG
AAGCATCGTC GCGAGGCCAC GCTGGCGGCG TCCCAGACGT ACCTGGAGAC GGCCGACAGC
GGCCGCTTCG AGGTCACCTA TCGCTTCGGC GAGGGCGTGC TGGAAGGCCC CGAACTGTCA
ATGACACGCG ACGCCCTGCA CATCCCCGGC TTCGATCGGC CGGTATCGCT GACGGTCGAC
AACCCCTACG GTCAGCTGTG A
|
|---|
| Protein sequence | MTHRHPQHYE ERGLSQLPVI VGMGGVNAAG RTSGHQAFRR TILDALPDTL QAQTILALAA
MMQLVTRLED GAWQDAHGEI LDAADVVSRY RQHVLDHTLI RRIEDERFGS EGIPANRAAQ
LDLDDALTFR VRRRQLPNDL PPTWQVRDID KRMVEVVVPP GSLNVLLPER RSAQVRSAGQ
LPSGFAPETL YRSVHHPRGL SMTIFGASDC LGQSGLDWSA LRNRLDPDAI AVYAGNSIGQ
LDNEGWGGLL QSFVGGGRAT SKQMPLGYGQ MPADFLNAYV LGSVGATGAV LGACASFLYN
LRLGLEDIRS GRRRVVMVGT SDAPITPEIV EGFRTMGALA DDESLKALDA LTLLTDSDYQ
RACRPFARNC GFTIAESTQF LLLMDDALAL ETGAQILGAV PDVFVNADGW KRSISAPGIG
NYITLAKSVS LARDMLGEDS VRHRSYLHAH GTSTPKNRTT ESHVFDMVAR THGIEAWPVA
AIKAFVGHSQ GGAAGDQLAS ALGTFAHGVI PGIATLDAVA DDVHAERLRF FRDPLPFEAD
ATFINAKGFG GNNATGLVIS PAATERLLAK RHGQRAVDDW KHRREATLAA SQTYLETADS
GRFEVTYRFG EGVLEGPELS MTRDALHIPG FDRPVSLTVD NPYGQL
|
|---|
| |