Gene Csal_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2848 
Symbol 
ID4028650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3179317 
End bp3180465 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content68% 
IMG OID637968056 
Productaminotransferase, class V 
Protein accessionYP_574893 
Protein GI92114965 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCAC CCGTGTACCT CGATTATGCC GCCACCACGC CCGTCGACCC GCGGGTCGCC 
GAGCTGATGG CACGTCACCT GACACTCGAT GGCGTCTACG CCAACCCCGC CTCGCGCAGC
CACATGCCCG GCTGGCTGGC CGAACAGGCG GTGGAAAGCG CCCGGCGTCA GGTCGCCGAC
CTGATCGCGG CCGACCCGCG TGAAATCGTC TGGACCAGCG GCGCCACCGA AGCGGACAAC
CTCGCGCTGA TCGGCTTCAT GCGGGCCAAC TGCGCACGCG GCCGGCACCT GGTGACCTCG
CGCATCGAGC ACAAGGCGGT CGTCGACACC GCCACGGCCC TCGAGGCCGA GGGCTTCGAG
GTGACCTGGC TGACGCCCGG CGCGGATGGC CGCGTGACGC CCACGCAGCT CAACGATGCC
ATGCGCGAGG ATACCGTGCT GGTCTCGCTG ATGGCCGTCA ACAACGAGCT GGGCAGCATT
CACGACCTGG CCGCGCTCGC CGAGGTGACC CATGCCGGTG GCGCGGTCCT GCATGTCGAT
GCCGCCCAGG CCACCGGCAA GATCGCGCTC GACGTCGGCG CCCTGGGCAT CGACCTGATG
TCGATGTCGG CGCACAAGAC CTACGGCCCC AAGGGCGTGG GCGCGCTTTA CGTCCGGCGC
AGCCCCGACA TCCGCCTCGA GGCCTTGATC CACGGCGGCG GCCACGAGCG CGGCATGCGT
TCGGGCACCC TGCCCACGCA CCAGATCGCC GGCATGGGGG AAGCCTTCTC CCTGGCGGCC
GACGAGCTCG AGCGCGATCG CGACAGGAGC CTGGCGCTGC GGCAACGCTT TCTCGACGGG
CTCGACGACT GCGCGGGCAT CCATTGCAAC ACGGCACTCG ACGTCTCGGT GCCCAACATC
GTCAACCTGG CATTCGAAGG CGTCGATGGC GAATCATTGC TGATGGCGCT GCGCGCGCTG
GCCGTCTCGA CCGGCTCGGC GTGCAACTCG GCGAGTGTCG AGCCATCCTA TGTATTGAAA
GCCATCGGGG TGGATCGCAT CCTCGCGCTG TCGTCCATAC GCTTCAGCTT CGGACGCTTC
ACCACCGAGG CCGACATCGA CACCGCGACC GCCGAACTTC GTCACGCACT CGGCGCCCTG
CGCCAATGA
 
Protein sequence
MTSPVYLDYA ATTPVDPRVA ELMARHLTLD GVYANPASRS HMPGWLAEQA VESARRQVAD 
LIAADPREIV WTSGATEADN LALIGFMRAN CARGRHLVTS RIEHKAVVDT ATALEAEGFE
VTWLTPGADG RVTPTQLNDA MREDTVLVSL MAVNNELGSI HDLAALAEVT HAGGAVLHVD
AAQATGKIAL DVGALGIDLM SMSAHKTYGP KGVGALYVRR SPDIRLEALI HGGGHERGMR
SGTLPTHQIA GMGEAFSLAA DELERDRDRS LALRQRFLDG LDDCAGIHCN TALDVSVPNI
VNLAFEGVDG ESLLMALRAL AVSTGSACNS ASVEPSYVLK AIGVDRILAL SSIRFSFGRF
TTEADIDTAT AELRHALGAL RQ