Gene Csal_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2413 
Symbol 
ID4026850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2708563 
End bp2709693 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content66% 
IMG OID637967615 
ProductABC transporter related 
Protein accessionYP_574459 
Protein GI92114531 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.392798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAT TGAACATCCG TCACGTCGAC AAGACGTTCG GTAGCACGCA AGTACTCAAG 
GATATTTCGC TGTCGATCGA CTCCGGCGAG TTCCTGATTC TGGTCGGCCC CTCGGGATGC 
GGGAAGTCGA CGCTGATGAA TGCCATCGCG GGGCTGGAAC CGGTGACGTC CGGCGAAATC 
CAGATCGGCG GTGAAGACGT CACCTGGCAT ACGCCGGCCG AGCGTGACAT CGCCATGGTG 
TTTCAGTCCT ACGCCCTGTA TCCGAGCATG AATGTGCGTC AGAACATCGC CTTCGGCCTG 
GAAATGCGCA AGATGCCCAA GGCCCAGCGC GAGGAGGCGG TCGCACGCGT GGCCGAGCTG 
CTGCAGATCA CGCCACTGCT CGACCGCAAG CCGTCGCAAC TCTCGGGCGG GCAGCGCCAG 
CGTGTCGCCA TGGGGCGGGC CCTGGCGCGC GAACCGCAGA TCTACCTGTT CGACGAGCCG 
CTCTCGAACC TGGATGCCAA GCTGCGTGTC GAGATGCGCA CCGAAATCAA GAAGCTGCAT 
CAGCGTCTGG GCACGACCAT CGTTTACGTG ACCCACGACC AGATCGAGGC CATGACCCTG 
GCCGATCGCA TTGCCGTGAT GCGCGACGGC GAGATCCTGC AACTGGGGAC GCCCGACGAA 
GTCTACAACG ACCCCGTGGA CATGTTCGTC GCGGGGTTCA TGGGCTCGCC GTCGATGAAC 
TTCATTCCCG TGACGCTGGT CAGCGGCGGC GACGGGTATG TGCTGCGCGT GCTCGATGGC 
GACGATCCCA CAGGGGCGCC ACTGGAGCTG CCCTGGCCGG CCGAGCGCGA TGCGCAGGCG 
CTGCAGGCGC GGGTCGGCGA GCGGCTGATC CTCGGACTGC GTCCCGAGCA CTTCGTCGAA 
GACGAAACGC GCATGGAAAC GTCGTTCGAC GGGACGCGGC TCGAGGTGAT GGCGACGGTG 
GTCGAGCCCA CCGGCGCGGA CATCCTGCTC CAGGCGACGC TGGGCGAGAC CGAGGCCACC 
ATGCGCCTGG GGCCCAAGAG TCGGGTGGCG GCCGGCGAGC GTGTCGCCCT GCGCGTCGAC 
ATGAGTCGGG CCGTGCTGTT CGAGGCGACG AGCCAGCGAC GCGTGGCCTA G
 
Protein sequence
MSALNIRHVD KTFGSTQVLK DISLSIDSGE FLILVGPSGC GKSTLMNAIA GLEPVTSGEI 
QIGGEDVTWH TPAERDIAMV FQSYALYPSM NVRQNIAFGL EMRKMPKAQR EEAVARVAEL 
LQITPLLDRK PSQLSGGQRQ RVAMGRALAR EPQIYLFDEP LSNLDAKLRV EMRTEIKKLH 
QRLGTTIVYV THDQIEAMTL ADRIAVMRDG EILQLGTPDE VYNDPVDMFV AGFMGSPSMN 
FIPVTLVSGG DGYVLRVLDG DDPTGAPLEL PWPAERDAQA LQARVGERLI LGLRPEHFVE 
DETRMETSFD GTRLEVMATV VEPTGADILL QATLGETEAT MRLGPKSRVA AGERVALRVD 
MSRAVLFEAT SQRRVA