| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2311 |
|---|
| Symbol | |
|---|
| ID | 4026270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2596006 |
|---|
| End bp | 2597058 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637967516 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_574360 |
|---|
| Protein GI | 92114432 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.90856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTCG CCACGATGTT CAAACGCAAT TCCCTGCTCG ATGAACGCTC GACCTGGATC
ACCAGCGTCG TCCTGATCGT CGGCATGCTG GCGGTGGTCG TGCTCCATGC CTTGCCGCCG
GATCATGCCT GGCACCTGAA CGGCTCCGTC GTCTCGCTGC TGGGCAAGTA CCTGACCTAC
ATGCTGCTGG CGCTGGCGGT GGATTTGATC TGGGGTTACC TGGGCATCCT GAGCCTGGGT
CACGGGGCCT TCTTCGCCCT GGGCGGCTAC GCCATGGGGC TCTACCTGAC CGCCCAGCAG
GCACCGCTGG CGCCCTGGCA GGCTGTCATG GCTCACTTTC CCGTGGCGGC GCTCGCCGTG
ATCCTGGCGC CGGGGCTGCT GGCGCTGGTC TTCGGCTGGC TGGCGTTTCG CTCGCGGGTC
ACCGGCGTGT ACTTCTCGAT CATCACCCAG GCGCTGACCT TTGCGCTGAT GCTGGCCTTC
AACCGCAACG AAATGGCCAT GGGGGGCAGC ACCGGGCTGA CGCGATTCGA TGAGTTGCTG
GGCTTCGCGC TGGCCGGCGA AGGCATGACC GTGGCGCTGT TCGTGGCCTC GGGCGTGGCC
GTGCTGCTGG CGTTCTGGGG CTGCAAGGCA GTCACCCGGT CACGGCTCGG GCGGGTGTGC
ATGGCCACCC GGGACGCCGA GGCACGGGTG CGCTTCATCG GCTATCGCGT CGAACACGTC
AAGCTGGCGG TGTTCGTGCT GTCGGCGATG ATCGCGGGCG TCGCCGGGGC GCTCTACGTG
CCGCAGGTCG GCATCATCAA CCCGAGCACC TTCGCGCCGC TGTTTTCCAT CGAGGTGGTG
GTCTGGGTCG CATTGGGCGG CCGCGCCACG CTTTACGGCG CGCTGCTCGG CGCGCTGGTC
GTCAATTATC TCAAGACGGT GCTGACCGGA GTGATGCCGG ATGCCTGGCT GTTTCTGCTC
GGGGGCTTGT TCGTGGTGGT CACCATGTTC CTGCCGCAGG GCGTGGCGGG CCTGATGGCG
CACCTGCGTC GGCGCCGGGA GGTGACCGCA TGA
|
|---|
| Protein sequence | MSLATMFKRN SLLDERSTWI TSVVLIVGML AVVVLHALPP DHAWHLNGSV VSLLGKYLTY
MLLALAVDLI WGYLGILSLG HGAFFALGGY AMGLYLTAQQ APLAPWQAVM AHFPVAALAV
ILAPGLLALV FGWLAFRSRV TGVYFSIITQ ALTFALMLAF NRNEMAMGGS TGLTRFDELL
GFALAGEGMT VALFVASGVA VLLAFWGCKA VTRSRLGRVC MATRDAEARV RFIGYRVEHV
KLAVFVLSAM IAGVAGALYV PQVGIINPST FAPLFSIEVV VWVALGGRAT LYGALLGALV
VNYLKTVLTG VMPDAWLFLL GGLFVVVTMF LPQGVAGLMA HLRRRREVTA
|
|---|
| |