Gene Csal_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2227 
Symbol 
ID4026419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2499071 
End bp2499379 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content58% 
IMG OID637967432 
ProductSSU ribosomal protein S30P / sigma 54 modulation protein 
Protein accessionYP_574277 
Protein GI92114349 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTCA ATATCACCGG TCATCACATC GAATTGACCG ATGCCCTGCG CGACTACGTC 
AATGAAAAGC TCGCACGTCT GGAACGGCAT TACGACAACA TCACCACCGT TCAAGTCACG
TTATCCATCG AAAAGGAACG TCACTTGGCC GCATGCACGC TTCATGCCGC AGGCGCCGAC
CTGCACGCCG ATGTGCAGAG CGACGACATG TACGCTGCCA TCGACGCCCT CACCGACAAG
CTCGACCGCC AGCTCGTCAA ACACAAAGAA AAGATGCAGG CACGCGCCCA GGGCGCCGGT
GCCCGTTGA
 
Protein sequence
MQVNITGHHI ELTDALRDYV NEKLARLERH YDNITTVQVT LSIEKERHLA ACTLHAAGAD 
LHADVQSDDM YAAIDALTDK LDRQLVKHKE KMQARAQGAG AR