Gene Csal_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2173 
Symbol 
ID4026667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2446272 
End bp2446712 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content53% 
IMG OID637967378 
Productmethylation 
Protein accessionYP_574223 
Protein GI92114295 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGTC AACAACGTGG TTTCACGCTG ATCGAACTGA TGATCGTCGT CGCGATCATC 
GGCATTCTCG CCGCCATCGC CATACCGCAG TATCAGAACT ATGTGGCGCG CTCGGAAGTC
AGCGCTGCGC TCGCGACCCT CAAATCGCTG CAGACGCCGG CCGAACTGGC GATTCAGGAG
GGTAGAACGA TAAGCGATGA CGATTTGTCC GAATTGGGGC TGTCCAGCGA CTCAGTACAA
AATGGAACGA TCGGGCTTAG TGACTTTGAT GGCGAGGATG ACTCTACGCC GAGTATCGTT
TTCACGTTTG ATGATGAAGG GAACTTCTCA AACGAAACTT TGACGCTTGA GCGTCAAGAC
GATGGAGGCT GGGAGTGCTC AGCATCGCAG GGTATTGACG ACGATGTCGT GCCCGATAGC
TGTGTGGCTA ACTCTAATTA A
 
Protein sequence
MERQQRGFTL IELMIVVAII GILAAIAIPQ YQNYVARSEV SAALATLKSL QTPAELAIQE 
GRTISDDDLS ELGLSSDSVQ NGTIGLSDFD GEDDSTPSIV FTFDDEGNFS NETLTLERQD
DGGWECSASQ GIDDDVVPDS CVANSN