Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1868 |
Symbol | |
ID | 4028388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 2124975 |
End bp | 2125895 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637967062 |
Product | LysR family transcriptional regulator |
Protein accession | YP_573919 |
Protein GI | 92113991 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.7479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCC GCTGGCTCGA AGATTTCATC GTGCTGGCCA GGGAACGTCA TTTTTCCCGG GCCGCCGATG CCCAGAACGT GACCCAGCCG ACCTTTTCGC GGCGTATCAA GCTGCTCGAA GAGGAAATGG GCACCACGCT GATCAACCGC CAGACCTTGC CATTGAGCTT GACCCCCGCT GGCGAGGAAT TTCTGGCGCT ATGCGAACAG ATCACCGAGC GGGTGCGCCT GACGCGCGAC CGCCTGCAAT CGATCGCCGC CGACGAGGCT CGTCGCATTC TGCTTGCCGC GCCGCAGAGT CTGCTCTCGA ACGTCGTGCC GGGATGGCTC GAGCGCCACG ACCTGGCGCA TTGCGTCTCT CCCTACCTGC GGGCCACGAG CTGGTTGATC GGCGATTATC TGCATGGCCT GGAGCGTGGC GAATGCGACC TCGCACTGTG CTACTGGCCG CGTGGTCGCA TCGCGCTCGA CCTCGACGTC AGCGAGCTGA CGTTCTTGAC CCTGGGCGAG GAACAGCTCG TGCCCGTCAG TGCGCCGGAT GGCACGGGGC GCCCGCGCTT TGCGCTCCCC GGGACGCGTC GCCAGCCGCA GCCCTTGATC GCGTTTCACC CGCGCGGCCT GATGGCGGCG GCACTCGAGG CCCACCTGCA CCGCCAGCCG GAACCGGTCT ACCTGACCAC GCTCAATGAA AGCGTGCAGG CCACCAACAT TCGCGAGCTG GTCACGCAGG GATACGGGCT CGGCTGGATA CCGCAGCGCA GTGTTCGTAC GGCCATGCAG AACGGCGAAC TGGTGCGTGC CGGCGACGCA CGCTGGGACG TGCCGCTCGA CATACGCCTG TATGCACGCC GGGACTCGCG GCATCCCGGA TTGCCGGGCC TGTGGCAGCA ACTGGAAGGC GCGAACGACC TGGGCAGCTA G
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Protein sequence | MEIRWLEDFI VLARERHFSR AADAQNVTQP TFSRRIKLLE EEMGTTLINR QTLPLSLTPA GEEFLALCEQ ITERVRLTRD RLQSIAADEA RRILLAAPQS LLSNVVPGWL ERHDLAHCVS PYLRATSWLI GDYLHGLERG ECDLALCYWP RGRIALDLDV SELTFLTLGE EQLVPVSAPD GTGRPRFALP GTRRQPQPLI AFHPRGLMAA ALEAHLHRQP EPVYLTTLNE SVQATNIREL VTQGYGLGWI PQRSVRTAMQ NGELVRAGDA RWDVPLDIRL YARRDSRHPG LPGLWQQLEG ANDLGS
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