| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1737 |
|---|
| Symbol | |
|---|
| ID | 4028952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 1980883 |
|---|
| End bp | 1981725 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637966925 |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
|---|
| Protein accession | YP_573788 |
|---|
| Protein GI | 92113860 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.747373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TACGCTTCGG CCCTCCGGGC CAGGAAAAGC CCGGCCTGCT GGATGCCAGC
GGCAAGATTC GCGACCTCTC GTCGCTGATC CAGGACGTCG CCGGCGAGTC GCTCGATGAC
ACCGCCCTGG CGCGCATCGC CCAAGCCGAT CACGAGAGCC TGCCGGAAGT CCCCGAAGGG
ACGCGTCTGG GGCCCTGCGT GGGTCGAGTC GGCAAGTTCA TCTGCATCGG CCTCAACTAC
TCCGACCATG CGGCGGAGAC CGGCGCCGAG GTGCCGCCGG AACCGGTGGT CTTCAACAAG
TGGACCAGCG CCATCTGCGG CCCCAACGAT GACGTGGAGA TCCCCCGCGA CTCGCAAAAG
ACCGACTGGG AGGTCGAGCT GGGTGTCGTC ATCGGCAAGG GCGGACGCTA CATCGACGAA
GCCGATGCCA TGAACCACGT GGCCGGCTAC TGCGTGATCA ACGACGTCTC CGAGCGGGAA
TTCCAGCTCG AGCGCAGCGG CAGCTGGGAC AAGGGCAAGG GCTGCGACAC CTTCGGCCCG
CTCGGCCCCT GGCTGGTCAC TCGGGACGAG ATCGCCGATC CCCAGTCGCT CGACATGTGG
CTGGAAGTCG ACGGCAAGCG TTATCAGGAC GGCAACAGCC GCACCATGGT CTATCAGATC
CCCTACCTGG TCGCCTACCT GAGCCGCTTC ATGAGCCTGC AGCCCGGCGA TGTCATCTCC
ACCGGCACGC CGCCGGGCGT CGGCGCGGGC CAGCAGCCGC AGGTCTTCCT CAAGCCCGGC
CAGACCATGC GCCTGGGGAT CGAAGGCCTC GGCGAGCAGT GCCAGCGCAC CAAGCAGGCG
TGA
|
|---|
| Protein sequence | MKLLRFGPPG QEKPGLLDAS GKIRDLSSLI QDVAGESLDD TALARIAQAD HESLPEVPEG
TRLGPCVGRV GKFICIGLNY SDHAAETGAE VPPEPVVFNK WTSAICGPND DVEIPRDSQK
TDWEVELGVV IGKGGRYIDE ADAMNHVAGY CVINDVSERE FQLERSGSWD KGKGCDTFGP
LGPWLVTRDE IADPQSLDMW LEVDGKRYQD GNSRTMVYQI PYLVAYLSRF MSLQPGDVIS
TGTPPGVGAG QQPQVFLKPG QTMRLGIEGL GEQCQRTKQA
|
|---|
| |