Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1729 |
Symbol | |
ID | 4028944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 1971649 |
End bp | 1972386 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637966917 |
Product | D-xylose dehydrogenase |
Protein accession | YP_573780 |
Protein GI | 92113852 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.380531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAG CGATTTATCC CAGCCTCAAG GACAAGACGG TCGTCATCAC CGGCGGCGGC TCCGGCATCG GCGCCGGGCT GGTCGAGGCC TTCGTCGCCC AGGGCGCGAA CGTCCACTTC CTCGATGTCG CCGAGACGCT CGCGAACGAG CTGGTCGAGC GCTGTGAAGG TGCCCCGACG TTCCACCACT GCGACCTGAC CCAGCCCGAC CAGCTGCGCG CCACGCTGGG CGAGATCGGC CACGTCGACG TGCTGATCAA CAACGCCGCC AACGACGACC GCCACAAGCT CGAGGACGTC ACGCCCGAGT ACTGGGAAGA CCGCATGAAC GTCAACCTGC GCCACCTGGT GCTCGCCGCC CGTGAGGTCG CCCCGAGCAT GCGCCGACAG GGTCAGGGGG CGATCATCAA TCTCGGCTCG ATCAGCTGGC ACCTGGGGCA GCCCGACATG CTGCTCTACG AAACCGCCAA GGCCGGTATC GAGGGTCTGA CCCGGGCCCT GGCGAGCGAT CTGGGCAGCG ACGGCATTCG CGTGAACTGC ATCATCCCCG GCAACGTCAA GACGCCGCGT CAATCGCGTT GGTACAGCCC CGAGGACGAA GCGCAGATCG TCGACGAGCA AAAGCTCAAG GTACGCATCC ATCCACATCA CGTGGCCGCG ATGGCGCTGT TCCTGGCCTC GGACGACGCC GCTGCCTGTA CCGCTCACAA CTACTGGGTC GATGCCGGCT GGCTGTAA
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Protein sequence | MSTAIYPSLK DKTVVITGGG SGIGAGLVEA FVAQGANVHF LDVAETLANE LVERCEGAPT FHHCDLTQPD QLRATLGEIG HVDVLINNAA NDDRHKLEDV TPEYWEDRMN VNLRHLVLAA REVAPSMRRQ GQGAIINLGS ISWHLGQPDM LLYETAKAGI EGLTRALASD LGSDGIRVNC IIPGNVKTPR QSRWYSPEDE AQIVDEQKLK VRIHPHHVAA MALFLASDDA AACTAHNYWV DAGWL
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