Gene Csal_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1641 
Symbol 
ID4025909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1868261 
End bp1869439 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content71% 
IMG OID637966830 
Productbenzoate transporter 
Protein accessionYP_573693 
Protein GI92113765 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0221313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCGC CGTCAGCGTT ACGCGATCTC TCCGTCTCGG CGCTGGTGGC GGGGTTCGTG 
GCCGTACTGG TGAGCTATGC CAGCTCGGCG GCGATCGTCT TTCAGGCCGC GGAAGCGGCA
GGCGCCAGCC CCGCGCAGAT CGGCGGCTGG TTGAGCACGC TGGGATTAGG CATGGGCGCC
ACCTCGCTGG GCCTGTCGCT TGTCTACCGC ACGCCCATTC TCACCGCCTG GTCGACGCCC
GGGGCGGCAC TGCTGGCCAC GAGTCTGGGC GACTACACCC TCGCCGAGGC CATCGGGGTA
TTCATGTTCT CGGGCGCCCT GGTGCTGGCC TGCGGCATCA CCGGCCTCTT CGCTCGCCTG
ATGGCCCGCA TTCCCCACGC CATCGCCGCC GCCATGCTCG CCGGCGTCCT GCTGCGCTTC
GGGCTCGAGG CCTTTGCCGC CCTGGACGAC GCTTTCGTAC TGGTCGGCGC CATGTGCGCC
GCGTACCTGC TCGGCCGACG TCTGTGGCCG CGTTTCGCCG TCCTGGGCGT GCTCGCCACG
GGCCTGGCCA TCGCCGGCGT TCAGGGCGAG ATCGACACGG CTCGGGCCTC CGTGACCCTC
GCCATGCCCG CGCCGATCAT GCCCGAATTC ACGCTTGCCT CGCTCATCGG CGTGGGCGTG
CCGCTGTTCG TGGTCAGCAT GGCCTCGCAG AACGCGCCGG GGGTGGCGAC CTTGCGGGCC
GCCGGCTATG CGCCGCCCAT TTCGCCGCTC ATCGCGGTGA CCGGGCTCGC CACGCTCGTG
CTGGCACCGC TGGGCGGGTT CTCGATCTGC CTGGCGGCGA TCACCGCCGC CATCTGCATG
GGGCCCGAGG CGCACCCCGC CCCCGAACGG CGCTACATGG CGGCGGCCTG TGCCGGCGGC
TTCTATCTGC TGGCGGGCGT CTTCGGCGGG TCCATCGGCA CCTTGTTCGA TGCCCTGCCC
CAGGCGTTGA TCGTGGCCAT CGCCGGGCTG GCGCTGCTGA CCACCATCGG CGGCAGTCTG
CATAACGCCC TGCACGATGC CCGCCAGCGC GACGCGGCGC TGGTCACCTT CCTGATCACC
GCCTCCGGGG TCAGCTTGCT GGGTGTCGGC GCCGCCTTCT GGGGGCTCGT CGGCGGCCTG
CTGACGCAGG GCATGCTGGG TGCCACGCGA CGGGCGTGA
 
Protein sequence
MQAPSALRDL SVSALVAGFV AVLVSYASSA AIVFQAAEAA GASPAQIGGW LSTLGLGMGA 
TSLGLSLVYR TPILTAWSTP GAALLATSLG DYTLAEAIGV FMFSGALVLA CGITGLFARL
MARIPHAIAA AMLAGVLLRF GLEAFAALDD AFVLVGAMCA AYLLGRRLWP RFAVLGVLAT
GLAIAGVQGE IDTARASVTL AMPAPIMPEF TLASLIGVGV PLFVVSMASQ NAPGVATLRA
AGYAPPISPL IAVTGLATLV LAPLGGFSIC LAAITAAICM GPEAHPAPER RYMAAACAGG
FYLLAGVFGG SIGTLFDALP QALIVAIAGL ALLTTIGGSL HNALHDARQR DAALVTFLIT
ASGVSLLGVG AAFWGLVGGL LTQGMLGATR RA