Gene Csal_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1574 
Symbol 
ID4027593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1793433 
End bp1794665 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content60% 
IMG OID637966763 
ProductNa(+)-translocating NADH-quinone reductase subunit F 
Protein accessionYP_573626 
Protein GI92113698 
COG category[C] Energy production and conversion 
COG ID[COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 
TIGRFAM ID[TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.136104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGATA CATCCATCAT CGTGATCGGC GTCGTCATGT TCACCGTGAT CGTGCTCGGT 
CTGGTGGCGG TGATCTTGGC AGCGCGCAGC CGCCTGGTCA GCAGCGGTGA CGTGTCCATC
GAGATCAACG GCGACCCCGA CAACACCCTG ACCACCCAGG CGGGTGGCAA GCTGCTGCAA
ACGCTTGCCG CCAACGGCAT CTTTCTCTCC TCCGCATGCG GTGGCGGCGG CTCCTGCGCC
CAGTGCCGGT GCCGCGTGGT CGACGGGGGC GGCTCGATTC TGCCCACCGA GGAATCGCAC
TTCACGCTGC GTGAGAAGAA GGAAGGCTGG CGGCTTTCCT GCCAGGTGCC GGTCAAGCAG
GACATGAAGG TCGAGGTCCC CGAAGAGGTG TTCGGGGTCA AGAAGTGGGA ATGCGAGGTC
ATCGAGAATC CCAACGTCGC CACCTTCATC AAGGAGCTCA ACCTCAAGCT GCCCGAGGGC
GAAGAGGTCG ACTTCCGTGC CGGCGGCTAC GTGCAGCTGG TGGCGCCGCC CTACGATATC
AAGTTCTCGG ATTTCGACAT CGAGGAGGAG TATCGCGGCG ACTGGGAGAA GTTCAAGCTG
TTCGACATCG CCCACAAGAA CAACGAAGAG ATCATTCGCG CTTATTCGAT GGCGAACTAT
CCCGATGAAA AGGGGATTCT CAAGTTCAAC ATTCGTATCG CGACGCCGCC GCCCAATACC
AACCATCCGC CCGGTCTGAT GTCGACCTAT GTCTTCGCGC TCAAGCCGGG AGACAAGGTG
ACGGTCATGG GGCCCTTCGG TGAGTTCTTC GCCAAGGACA CCGATGCCGA GATGATCTTC
ATCGGCGGCG GTGCGGGCAT GGCGCCGATG CGCAGCCATA TCTTCGACCA GCTCAAGCGC
CTCAAGTCCA CCCGCAAGAT CTCGTTCTGG TACGGGGCAC GCTCGTGGCG CGAGACCTTC
TATAACGAAG AGTACGATCA GCTGGCCGAG GAGTTCGATA ACTTCGAGTG GCACCTGGCG
CTTTCGGATC CTCTGCCGGA AGACAACTGG CAGGGCGACA CGGGCTTCAT CCATAACGTG
CTCTACGAGA AGTATCTCAA GGATCACCCG GCGCCCGAGG ACTGCGAGTA CTACATGTGC
GGTCCGCCCA TCATGAATGC CTCGGTCATC AAGATGCTGA CCGACATGGG GGTCGAGCCC
GAGAACATCA TGCTGGACGA CTTCGGCGGA TGA
 
Protein sequence
MVDTSIIVIG VVMFTVIVLG LVAVILAARS RLVSSGDVSI EINGDPDNTL TTQAGGKLLQ 
TLAANGIFLS SACGGGGSCA QCRCRVVDGG GSILPTEESH FTLREKKEGW RLSCQVPVKQ
DMKVEVPEEV FGVKKWECEV IENPNVATFI KELNLKLPEG EEVDFRAGGY VQLVAPPYDI
KFSDFDIEEE YRGDWEKFKL FDIAHKNNEE IIRAYSMANY PDEKGILKFN IRIATPPPNT
NHPPGLMSTY VFALKPGDKV TVMGPFGEFF AKDTDAEMIF IGGGAGMAPM RSHIFDQLKR
LKSTRKISFW YGARSWRETF YNEEYDQLAE EFDNFEWHLA LSDPLPEDNW QGDTGFIHNV
LYEKYLKDHP APEDCEYYMC GPPIMNASVI KMLTDMGVEP ENIMLDDFGG