Gene Csal_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1342 
Symbol 
ID4027737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1538785 
End bp1539900 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content66% 
IMG OID637966521 
Productdihydroorotate oxidase A 
Protein accessionYP_573396 
Protein GI92113468 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGGCC CGTCTCGCCG CATGGCGAGG CGGGCCCTGC GCTTTTGCAT GCGCATGAGC 
TATACTAGCC GCCCGCCGTT TCCCGCTTTT CGTTTCGCCC GAGGACTCAT GTACCCGCTG
GCTCGCTCGC TACTGTTCCG TCTCGACCCC GAAACCGCTC ACGGTCTCGC ACTCGCTTCG
CTGTCGGGGG CACATCGCCT CGGCCTGACC AAATGGCTCG GCGGTGAACG CGTCGAGGCA
CCGGTGACGC TCATGGGTCT GACGTTCCCC AATCGTGTGG GGCTGGCGGC AGGGCTCGAC
AAGAACGCCG AGCATCTCGA TGCGCTGGGT GCGCTGGGGT TCGGCTTCGT CGAAGTGGGC
ACGGTGACGC CGCGTCCGCA AGCGGGCAAT CCCAGGCCGC GTCTGTTTCG CGTGCCGGAA
CGCGGCGCGA TCATCAACCG CATGGGATTC AACAACGCCG GCGTCGACCG ACTCGTCGAC
AACGTGCGCA AGAGCCGGTA CGCGGGCGTC ATCGGCATCA ACATCGGCAA GAACCTGGAT
ACCCCGGTGG AACGCGCGGT GGACGATTAC CTGACGTGCC TGCGCAAGGT GCATGCCCAC
GCGCATTACG TCACTGTCAA TCTGTCGTCG CCCAACACGC CGGGGTTGCG CAACCTGCAA
TTCGGCGAGC ATCTGGATGC GTTGCTGGGG ACGCTGCGCG AGGAAAAGCG CCGCCTCGAC
GAGAGCCACG GTCGGACGGT GCCGCTGGCC GTGAAAATCG CGCCTGACAT GCAGGCCGAG
GAAGTGGCGC TGGTGGCACG CTCGCTGGCT GACCATGCAG TGGACGCGGT CATCGCCACC
AATACCACGA TCGCGCGCGA CGCGGTCGAG GGGCTGGCAC ATGCCGAGGA GTTGGGTGGC
CTTTCCGGGC GGCCGGTATT CGAGCCTTCC AATGCGGTGA TTCGCGAGTT GCGCCGACAC
CTGCCAACGC TGCCGATCAT CGGCGTGGGC GGTATCGACA GCGGTGACGC CGCGAAGGCC
AAGCGCGAGG CGGGCGCGGA TCTCGTCCAG GTTTATACCG GCTTTATCTA CCGTGGACCG
TCGCTGGTGG GGGAGTGCGC GCGGGCATTG ACATAA
 
Protein sequence
MQGPSRRMAR RALRFCMRMS YTSRPPFPAF RFARGLMYPL ARSLLFRLDP ETAHGLALAS 
LSGAHRLGLT KWLGGERVEA PVTLMGLTFP NRVGLAAGLD KNAEHLDALG ALGFGFVEVG
TVTPRPQAGN PRPRLFRVPE RGAIINRMGF NNAGVDRLVD NVRKSRYAGV IGINIGKNLD
TPVERAVDDY LTCLRKVHAH AHYVTVNLSS PNTPGLRNLQ FGEHLDALLG TLREEKRRLD
ESHGRTVPLA VKIAPDMQAE EVALVARSLA DHAVDAVIAT NTTIARDAVE GLAHAEELGG
LSGRPVFEPS NAVIRELRRH LPTLPIIGVG GIDSGDAAKA KREAGADLVQ VYTGFIYRGP
SLVGECARAL T