Gene Csal_1322 details

Gene Information

• Locus tag: Csal_1322
• ID: 4027776
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: -
• Start bp: 1505305
• End bp: 1507299
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637966501
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_573376
• Protein GI: 92113448
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0577384
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGACA TCGACGACAC CCTGCAACGC GTCTTCGGCT ACGCCGACTT CCGCCCCGGC 
CAGCGCCAGG TGGTCGAGGC CGTGACCCAG GGGCGCTCGG CGGCGGCGAT ATTTCCCACC 
GGATCCGGCA AGTCGCTCTG CTACCAGCTG CCGGCGCTGC ATCTGCCGCA CCTGACCCTG 
GTGGTATCGC CGCTGCTGGC GCTGATGCAG GATCAACTCG AGTTCCTGCG CCGCCACGGC 
ATCGCCGCGG CGAGCCTCGA CTCTCGCCAG AGCCGGGAGG AAGCCTCGGC GGTGATGGAC 
GGCGTCAGGC GCGGCGACAT CCGCATCCTG ATGATTTCGG TGGAACGCCT CAAGAACGAG 
CGCTTCCGCG CCTTCCTGCA GCGGGTGCCG GTGTCGTTGC TGGTGGCCGA CGAGGCGCAC 
TGCTTGTCCG AGTGGGGCCA CAATTTTCGT CCCGACTATC TCAAGCTGCC CGCCTATCAG 
CGTGAGTTCG CCATTCCGCA GGCGCTGTTG CTCACCGCCA CGGCCACGCC GCGCGTCATC 
GACGACATGC GCGACAGCTT CGCCATCGAC GCCCGGGATG TCGCCGCCAC GGGCTTCTAT 
CGTCCCAATC TCGACCTGCA GGTGCAGCCC ACCGCCACCG AGCGCCGTCC CCGCGCCCTG 
GTCGAGTGGC TGGGGCCGCG CCTGGCCGCC TCGCCGCCCC AGCCCAGCAT CGTCTACGTC 
ACCCTGCAGA AAACCGCCGA GCAGATGGCG GCGTATCTGG GCAAGGCGGG GCTCGAGGCC 
CGCGCCTATC ACGCCGGCCT CGACGGCGAG ACCCGCGATG CCCTGCAGCA GGCGTTCATG 
AACGGCGAGA TCAATTGCAT CGTCGCCACC ATCGCCTTCG GCATGGGCAT CGACAAGGCC 
GATATCCGCA ACGTCGTGCA TTTCGATCTG CCCAAGTCGA TCGAAAACTA CAGCCAGGAG 
ATCGGTCGCG CCGGACGCGA CGGGCAACCC TCGAGCTGCC TGATGCTCGG CGGCCGCGAC 
GCCCTGGGTG CGCTGGAAAA CTTCGTCTAC GGCGATACGC CCGAGCGCGA CGGCATCGAG 
CGCGTCCTGC GGGACATCCG TGATGCCGCG CCCCAGGGTC AGTGGGAGGT ACGCCTGAAC 
GCCCTCTCCC AGCACAGCAA CATACGGCCG CTGCCGCTCA AGACACTGCT GGTGAGACTC 
GAGCTCGAGG GCGTCATCGC CCCGCGCTAC GCCTATTTCG CCGAATATCG CTTCAAGTAT 
CTGATCGAGC CGGAGGCACT GATCGAGCGT TTCAACGGCG AACGTCGCGA TTTCGTCGCC 
GCCCTGATCG AGGCCTCGCC CAGAGCCAAG ACATGGTGCG CGCTGGACCA TGAGGCGCTC 
GATGCCCTGG GTGCCGAGCG CGGTCTCGAT ACCACACGGC GTCGCGTCAT CAGCGCCCTG 
GAGTATTTCA ACGATCAGGG CTTCATCCAG CTCGAAAGCA AGCAGATGAC CGAGGTGTAC 
GGAGTGCTGC AGGCCGAGTT CGATATCGCG GCGCTCGCGA CTCACCTGAC CGAGTATTTC 
CAGCGCAAGG AAGCCGCCGA GATCGAACGG CTGCAGGCCA TGCTGACCCT GTTCGAATCG 
ACGACCTGCC TCAGCCGCCG TCTGGCCGAT TATTTCGGCG ATCACCAGGC GCCCGAGCAT 
TGCGGTCATT GTTCGGTATG CCGTGGCCAC GTCGCCCGGT TGCCCGCGGA CACCGCACGC 
GCACCGCTCG ATCCCCGGCA GCTCGCGGCA TGGTGCGCGC CGCTTCAAGA ACGCCTGGCC 
ACGCTGGCCG ACGCACCACC GCCCAGCACA GACCTGCTCA CGCGCTATCT CGCGGGACTC 
ACCACCCCGC TGCTGACGCG CCTCAAGGCA CGCCAGCTCG AGGGGTTTGC GGCGCTGGAA 
GACCGCCCCT ACCGCGACAT CCACGAGGCC GTGCGAGTGT TGTCCACGGA TAACGCCCAG 
GCCGCCGGAC GCTAG 

 

Protein sequence

MADIDDTLQR VFGYADFRPG QRQVVEAVTQ GRSAAAIFPT GSGKSLCYQL PALHLPHLTL 
VVSPLLALMQ DQLEFLRRHG IAAASLDSRQ SREEASAVMD GVRRGDIRIL MISVERLKNE 
RFRAFLQRVP VSLLVADEAH CLSEWGHNFR PDYLKLPAYQ REFAIPQALL LTATATPRVI 
DDMRDSFAID ARDVAATGFY RPNLDLQVQP TATERRPRAL VEWLGPRLAA SPPQPSIVYV 
TLQKTAEQMA AYLGKAGLEA RAYHAGLDGE TRDALQQAFM NGEINCIVAT IAFGMGIDKA 
DIRNVVHFDL PKSIENYSQE IGRAGRDGQP SSCLMLGGRD ALGALENFVY GDTPERDGIE 
RVLRDIRDAA PQGQWEVRLN ALSQHSNIRP LPLKTLLVRL ELEGVIAPRY AYFAEYRFKY 
LIEPEALIER FNGERRDFVA ALIEASPRAK TWCALDHEAL DALGAERGLD TTRRRVISAL 
EYFNDQGFIQ LESKQMTEVY GVLQAEFDIA ALATHLTEYF QRKEAAEIER LQAMLTLFES 
TTCLSRRLAD YFGDHQAPEH CGHCSVCRGH VARLPADTAR APLDPRQLAA WCAPLQERLA 
TLADAPPPST DLLTRYLAGL TTPLLTRLKA RQLEGFAALE DRPYRDIHEA VRVLSTDNAQ 
AAGR