| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1266 |
|---|
| Symbol | |
|---|
| ID | 4027587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1444494 |
|---|
| End bp | 1445090 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637966445 |
|---|
| Product | colicin V production protein |
|---|
| Protein accession | YP_573320 |
|---|
| Protein GI | 92113392 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.488094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGA CGTGGCTCGA CTGGGCGTTT CTGGCGGTAT TGACGATCTC CATGCTGGCC
GGTTTCATGC GCGGTCTGGT ACGTGAGGCA CTGGGACTGG CCGCCTGGGT GGCGGCCCTG
CTGGGCGCGC GCATGTTCGC CCCGGCGGTG GCCGAGATGC TGGCGCCCTA TATCGAGCAT
CCCGACATAC GCCTGGTCCT CGGGTTCGTG CTGGTCATCT TCGTCATCGT CATGCTCTGC
GGGTTCTTGA TCCGCATGAT CAATGCCGCC ATCGAATGGG TCGGCATGGG CTTTTTCAAT
CGCGTGGCAG GGGCGGCGTT CGGTGCCGCG CGTGGCGCGC TGATCCTGGT GCTGGCCACG
GTCATTCTGA CCCTGACGCC ACTGTCGGGA CTGGCCGCCT GGCAGAACGC GCAACTGCGC
CCGGCGTTCG AGCAGTTGCG GGACTGGTCG GTGAAGCGAC TGGAGGCGTG GGAGATCGAC
ACCTCGGAGG CCGAGCGCGC GTTGCGCGAT ACGGGGCGCG ACGCGGCCCA GGACGTGCTC
GAGTCGCGCC CGCCCGAGAC CGAGAACGGC ACGCCGCCGG ACACCAGGGC GCCGTGA
|
|---|
| Protein sequence | MTLTWLDWAF LAVLTISMLA GFMRGLVREA LGLAAWVAAL LGARMFAPAV AEMLAPYIEH
PDIRLVLGFV LVIFVIVMLC GFLIRMINAA IEWVGMGFFN RVAGAAFGAA RGALILVLAT
VILTLTPLSG LAAWQNAQLR PAFEQLRDWS VKRLEAWEID TSEAERALRD TGRDAAQDVL
ESRPPETENG TPPDTRAP
|
|---|
| |